Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004840`

染色体: Chr02 坐标: 70524776-70533970 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004840`
名称	SmilChr02G004840
描述	diacylglycerol kinase 1-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	70524776 - 70533970 / `-`

ID 对照

NCBI Gene ID	`LOC131008836`
GeneID	`131008836`
locus_tag	`-`
NCBI Name	`LOC131008836`
原始查询	`LOC131008836`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	diacylglycerol kinase 1-like
产物	diacylglycerol kinase 1-like
Arabidopsis	`AT5G07920` (DGK1) diacylglycerol kinase1 [Source:NCBI gene (formerly Entrezgene);Acc:830686] identity=70.5; qcov=1.01; evalue=0; confidence=high
Rice	`Os12g0576900` - identity=57.4; qcov=0.986; evalue=0; confidence=high
GO	GO:0004143 (ATP-dependent diacylglycerol kinase activity); GO:0007205 (GO:0007205)
KEGG	smil00561 (Glycerolipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage))
Pfam	PF00130 (C1_1); PF00609 (DAGK_acc); PF00781 (DAGK_cat)
InterPro	-
eggNOG	-
NR	GeneID:131008836

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	0.40000	`XP_057791887.1`
2	Cell membrane	细胞膜	0.20000	`XP_057791887.1`
3	Golgi apparatus	高尔基体	0.20000	`XP_057791887.1`
4	Trans-golgi network	Trans-golgi network	0.20000	`XP_057791887.1`
5	Nucleus	细胞核	0.00000	`XP_057791887.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:70525008`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A5,B125,B35,B37
`Chr2:70525032`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B104,D10
`Chr2:70525069`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B50,C14,C42
`Chr2:70525607`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B50,C42
`Chr2:70525612`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B97
`Chr2:70525612`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr2:70525623`	`T`	`TC`	1bp_insertion	frameshift_variant	2	B50,C42
`Chr2:70525623`	`T`	`TC`	1bp_insertion	CDS_variant	2	B50,C42
`Chr2:70526036`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B126,B55,B77,C23,C8
`Chr2:70526056`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A9,B107,B6,C63
`Chr2:70526072`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B64,B73,C4
`Chr2:70528895`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A5,B101,B125,B35,B37

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057791887.1

728 aa

364

728

C1_1

DAGK_cat

DAGK_acc

PF00130 C1_1 153-212 aa PF00781 DAGK_cat 361-461 aa PF00609 DAGK_acc 507-664 aa

XP_057791888.1

728 aa

364

728

C1_1

DAGK_cat

DAGK_acc

PF00130 C1_1 153-212 aa PF00781 DAGK_cat 361-461 aa PF00609 DAGK_acc 507-664 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057791887.1`	Pfam	`PF00130`	C1_1	Domain	153	212	5.7e-11	42.8	Phorbol esters/diacylglycerol binding domain (C1 domain)
`XP_057791887.1`	Pfam	`PF00781`	DAGK_cat	Family	361	461	1.3e-25	90.1	Diacylglycerol kinase catalytic domain
`XP_057791887.1`	Pfam	`PF00609`	DAGK_acc	Family	507	664	1.5e-56	191.8	Diacylglycerol kinase accessory domain
`XP_057791888.1`	Pfam	`PF00130`	C1_1	Domain	153	212	5.7e-11	42.8	Phorbol esters/diacylglycerol binding domain (C1 domain)
`XP_057791888.1`	Pfam	`PF00781`	DAGK_cat	Family	361	461	1.3e-25	90.1	Diacylglycerol kinase catalytic domain
`XP_057791888.1`	Pfam	`PF00609`	DAGK_acc	Family	507	664	1.5e-56	191.8	Diacylglycerol kinase accessory domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057935905.1
ACTTTATTCCAATCATTCACACCAATCTTTTACTTTTACTACTTCTCTTTGAAGTTTCTACTTCAAATCTCCTTTCCCTCTAGAAAGTGCTTCCACTCTCAGAGAATCTTGATTCAGCAGTATCTCCCACGAAAATGGCGTCCAAACTCACAAAAACGAATTAAATTGTACTTCACACACCTACACACACTTAGCAGAAACACCAATCAATCATACACACAAACGCGCGCACCAGTTTATACCAAGTTTTAAGCTTCTAT...

XM_057935904.1
CTTTTACTACTTCTCTTTGAAGTTTCTACTTCAAATCTCCTTTCCCTCTAGAAAGTGCTTCCACTCTCAGAGAATCTTGATTCAGCAGTATCTCCCACGAAAATGGCGTCCAAACTCACAAAAACGAATTAAATTGTACTTCACACACCTACACACACTTAGCAGAAACACCAATCAATCATACACACAAACGCGCGCACCAGTTTATACCAAGTTTTAAGCTTCTATTTCACCTGCTCGCTTGTTGACCTCTTTGATCG...

CDS

2 records

下载 CDS FASTA

LOC131008836
ATGGACGAGTACGGGGAATCTGAAGGTTTTGTTCCTAGCTGGATGAGTAAAAATGCAATGGAAACGGAAGAATCTCATCTGTTCGTTATCTCTTTCTTTGTAGCCAGTCTGATAGGAATATTGACTATATTCTACACAGCTTGGCGGTGGAGAAGAAATATTAACTTAAGTTGGATGAAAGCCATAGCGAGATCAAAGAAAAACCCTAAGTCAATGAACAAAGTTCCACTGGTGCCTCACACTTGGAGTTTGGAATCTTT...

Protein

2 records

下载 Protein FASTA

XP_057791887.1
MDEYGESEGFVPSWMSKNAMETEESHLFVISFFVASLIGILTIFYTAWRWRRNINLSWMKAIARSKKNPKSMNKVPLVPHTWSLESLTRSKSLNCCVCLESISPSQTLGPMVASDSYINRCSICGVAAHLDCSAGAHKDCKCVSMFGCGHVLHQWAVQWTEETDRPDESSFCSHCEEPYTGSFLEGSPIWCCLWCQRLVHVDCHSSMLNETGDICDLGPFKRLVLSPLYVKQLKRNSSGGFLSSITAGANEVASSVRATI...

XP_057791888.1
MDEYGESEGFVPSWMSKNAMETEESHLFVISFFVASLIGILTIFYTAWRWRRNINLSWMKAIARSKKNPKSMNKVPLVPHTWSLESLTRSKSLNCCVCLESISPSQTLGPMVASDSYINRCSICGVAAHLDCSAGAHKDCKCVSMFGCGHVLHQWAVQWTEETDRPDESSFCSHCEEPYTGSFLEGSPIWCCLWCQRLVHVDCHSSMLNETGDICDLGPFKRLVLSPLYVKQLKRNSSGGFLSSITAGANEVASSVRATI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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