Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005040`

染色体: Chr02 坐标: 72131253-72136802 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005040`
名称	SmilChr02G005040
描述	kinesin-like protein KIN-14I
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	72131253 - 72136802 / `+`

ID 对照

NCBI Gene ID	`LOC131008912`
GeneID	`131008912`
locus_tag	`-`
NCBI Name	`LOC131008912`
原始查询	`LOC131008912`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinesin-like protein KIN-14I
产物	kinesin-like protein KIN-14I
Arabidopsis	`AT2G47500` (AT2G47500) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819363] identity=52.7; qcov=1.02; evalue=0; confidence=high
Rice	`Os12g0547500` (OsKCH1) - identity=59; qcov=0.764; evalue=0; confidence=high
GO	GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF00225 (Kinesin); PF00307 (CH); PF16796 (Microtub_bd)
InterPro	-
eggNOG	-
NR	GeneID:131008912

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	1.00000	`XP_057792007.1`
2	Phragmoplast	Phragmoplast	1.00000	`XP_057792007.1`
3	Cytosol	细胞质基质	0.80000	`XP_057792007.1`
4	Spindle	Spindle	0.20000	`XP_057792007.1`
5	Nucleus	细胞核	0.00000	`XP_057792007.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:72131642`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B13
`Chr2:72131643`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr2:72131655`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr2:72131907`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B129
`Chr2:72131922`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B111,B113
`Chr2:72131947`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B111,C57,C7,C75
`Chr2:72131954`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C74
`Chr2:72132178`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C29,C40,C75
`Chr2:72132222`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B74
`Chr2:72132275`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B108
`Chr2:72132489`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B56,B96,C35
`Chr2:72132510`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C55

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792007.1

976 aa

488

976

Microtub_bd

Kinesin

PF00307 CH 60-159 aa PF16796 Microtub_bd 384-543 aa PF00225 Kinesin 431-723 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792007.1`	Pfam	`PF00307`	CH	Domain	60	159	9.3e-15	55.5	Calponin homology (CH) domain
`XP_057792007.1`	Pfam	`PF16796`	Microtub_bd	Domain	384	543	2e-44	152.0	Microtubule binding
`XP_057792007.1`	Pfam	`PF00225`	Kinesin	Domain	431	723	2e-108	363.0	Kinesin motor domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057936024.1
TTTCTTTCTTTAAAATAAAAATAAATAAGAACTTTTGAATTCTTGTTATTTTTAACTTTTTACATTTTTTTTTTCCTTCATATTTTCGGTTTCTCTTCTTCTTTCAATCTTCTCTCTCTATAACTTCCCCGCCGTTTCTCTATCTCTGCTCTCCTCTTCTTCTTCTTCTTCTTCAAACAAAATTGTTCTCTGCAATCCCTCTTCACATATTAAGAAGCCAGCACTTATTGGTGGAAAAAGACGCGATTTTTGCGCCTATA...

CDS

1 records

下载 CDS FASTA

LOC131008912
ATGGCGGAAGGAATGTCGCAATTCGACGCTGCAGCGGCGGAGGAGGACGCGCTTCTAGGCAAGAGGCTGAACGACATGGATTTGGCCTCAAGAAAAGCAGAAGAAGCTTCATTGAGAAGATATGCTGCGGCCGGCTGGTTGAGGAAGGCGGTGGGAGTGGTTACAGCAAGGGATTTGTCTGATCAGCCTTTGGAGGAAGAATTTCGGATTGCTTTGCGAAGTGGAATTATACTTTGCAATGCACTGAACAAGATTCAGCC...

Protein

1 records

下载 Protein FASTA

XP_057792007.1
MAEGMSQFDAAAAEEDALLGKRLNDMDLASRKAEEASLRRYAAAGWLRKAVGVVTARDLSDQPLEEEFRIALRSGIILCNALNKIQPGAIPKVVEAPSDSVIVPDGAALSAFQYFENVRNFLDSAEEMGIPVFEASDLEQGGKSSRIVNCVLALKSYYEWKEGGGKGVWKYSGNWKPHSASKQFVRKNSDPFVNSLSRNSSIVEQNGQDFNEMGTSDALHFYVRELLSDKKQEDIPLIVGSMLSKVMEEFEQRLARQNEQ...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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JBrowse

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