Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004966`

染色体: Chr02 坐标: 71566548-71573018 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004966`
名称	SmilChr02G004966
描述	protein EI24 homolog
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	71566548 - 71573018 / `-`

ID 对照

NCBI Gene ID	`LOC131008996`
GeneID	`131008996`
locus_tag	`-`
NCBI Name	`LOC131008996`
原始查询	`LOC131008996`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein EI24 homolog
产物	protein EI24 homolog
Arabidopsis	`AT4G06676` (AT4G06676) etoposide-induced protein [Source:NCBI gene (formerly Entrezgene);Acc:826112] identity=60.3; qcov=0.932; evalue=1.91e-90; confidence=high
Rice	`-` -
GO	GO:0005783 (endoplasmic reticulum); GO:0016236 (macroautophagy)
KEGG	-
Pfam	PF07264 (EI24)
InterPro	-
eggNOG	-
NR	GeneID:131008996

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057792151.1`
2	Endoplasmic reticulum membrane	内质网膜	0.80000	`XP_057792151.1`
3	Golgi apparatus	高尔基体	0.20000	`XP_057792151.1`
4	Nucleus	细胞核	0.00000	`XP_057792151.1`
5	Chromosome	染色体	0.00000	`XP_057792151.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:71567276`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A11
`Chr2:71568327`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B23
`Chr2:71570065`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B104,B84
`Chr2:71570235`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B131
`Chr2:71570275`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B12
`Chr2:71571726`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B40
`Chr2:71571741`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C86
`Chr2:71571778`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B110,B33,C12,D8
`Chr2:71571842`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:71572565`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C51,D4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792151.1

335 aa

168

335

EI24

PF07264 EI24 33-274 aa

XP_057792152.1

273 aa

136

273

EI24

PF07264 EI24 48-212 aa

XP_057792153.1

235 aa

118

235

EI24

PF07264 EI24 15-174 aa

XP_057792154.1

235 aa

118

235

EI24

PF07264 EI24 15-174 aa

XP_057792155.1

235 aa

118

235

EI24

PF07264 EI24 15-174 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792151.1`	Pfam	`PF07264`	EI24	Family	33	274	6.4e-29	102.2	Sulfate transporter CysZ/Etoposide-induced protein 2.4
`XP_057792152.1`	Pfam	`PF07264`	EI24	Family	48	212	1e-23	85.2	Sulfate transporter CysZ/Etoposide-induced protein 2.4
`XP_057792153.1`	Pfam	`PF07264`	EI24	Family	15	174	1.2e-23	85.0	Sulfate transporter CysZ/Etoposide-induced protein 2.4
`XP_057792154.1`	Pfam	`PF07264`	EI24	Family	15	174	1.2e-23	85.0	Sulfate transporter CysZ/Etoposide-induced protein 2.4
`XP_057792155.1`	Pfam	`PF07264`	EI24	Family	15	174	1.2e-23	85.0	Sulfate transporter CysZ/Etoposide-induced protein 2.4

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057936168.1
GAGTGTAAGGGTGGATTGAGAATTTGAGATCAGTGTCCACGCCAACATAGGTAATCAGCATATAGTAATGGTGGGGTCCACCGTCCACCCCATAAACCTTTTGCTGAAGTCTTGAGCAAAAACGATACCATTCTGTCGTCGCTATTCCCAATTGCGGAGGTGAGACAAAGAGAAAGCACTCGCGGGTTGTGATGGATGGGAGAAGCATAAGGAGTTTAATAGGCAGCTTCAAAACAAAATCGAAGCAAGTATCCCTCTTG...

XM_057936170.1
GTAGGTCAAGGGAGATCGCTATCCGTACTGGACAGTGTTTCCTATTGAATGGCTTCATTTTCTTGGGAAGTATACTTGTTCTGAGATCAGTTGTCATTCCCACACTGCAATGGGTGTTGCCTGATGTGTGCCTCCAGAATAAATCTCAAGAACTATGTCCATTTGGGGGTGTTCTGGTTCTACCCAATGTATATATCCAGCTTTATCCTAAACACACTCTGGTATAATGATATTGCAAAGTATGGGTTTTTTGCAATTGA...

CDS

5 records

下载 CDS FASTA

LOC131008996
ATGGATGGGAGAAGCATAAGGAGTTTAATAGGCAGCTTCAAAACAAAATCGAAGCAAGTATCCCTCTTGTGGGCGGTGGGTTTCAGAGAGGCTTGCTGTCTTCACCGCGTCGTAATATACTGTCTCAGGTCAAGGGAGATCGCTATCCGTACTGGACAGTGTTTCCTATTGAATGGCTTCATTTTCTTGGGAAGTATACTTGTTCTGAGATCAGTTGTCATTCCCACACTGCAATGGGTGTTGCCTGATGTGTGCCTCCA...

LOC131008996
ATGAGGAGTATACTTGTTCTGAGATCAGTTGTCATTCCCACACTGCAATGGGTGTTGCCTGATGTGTGCCTCCAGAATAAATCTCAAGAACTATGTCCATTTGGGGGTATTTCCAGATTTTATTCCTTGTTACAACATGGACTGATTCAACTCTTCTACGTGTTCTGGTTCTACCCAATGTATATATCCAGCTTTATCCTAAACACACTCTGGTATAATGATATTGCAAAGTATGGGTTTTTTGCAATTGAGAAGCATGG...

Protein

5 records

下载 Protein FASTA

XP_057792151.1
MDGRSIRSLIGSFKTKSKQVSLLWAVGFREACCLHRVVIYCLRSREIAIRTGQCFLLNGFIFLGSILVLRSVVIPTLQWVLPDVCLQNKSQELCPFGGISRFYSLLQHGLIQLFYVFWFYPMYISSFILNTLWYNDIAKYGFFAIEKHGTSSSESFVEKDTSASDKATDIEGLMIEVAEQVYSVLLLSFFFLEVYATGFIPFIGKALNLLLLSWMYAYYCFEYKWNYSGFSLDKRLDFFESNWPFFAGFGSPCVLAAFFY...

XP_057792152.1
MRSILVLRSVVIPTLQWVLPDVCLQNKSQELCPFGGISRFYSLLQHGLIQLFYVFWFYPMYISSFILNTLWYNDIAKYGFFAIEKHGTSSSESFVEKDTSASDKATDIEGLMIEVAEQVYSVLLLSFFFLEVYATGFIPFIGKALNLLLLSWMYAYYCFEYKWNYSGFSLDKRLDFFESNWPFFAGFGSPCVLAAFFYSPLVSYGVMALLFPLFVLTATGSEADKVIASQRKKWNGAGLGRIPIFVSSNYLSMKVLSLFP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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