当前解析结果
SmilChr02G004924| 统一新 Gene ID | SmilChr02G004924 |
|---|---|
| 名称 | SmilChr02G004924 |
| 描述 | uncharacterized SmilChr02G004924 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 71252206 - 71253030 / - |
| NCBI Gene ID | LOC131009052 |
|---|---|
| GeneID | 131009052 |
| locus_tag | - |
| NCBI Name | LOC131009052 |
| 原始查询 | LOC131009052 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:823905]; symbol=AT3G47510; hit=AT3G47510; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:823905]; symbol=AT3G47510; hit=AT3G47510; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G47510 (AT3G47510)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:823905] identity=34.9; qcov=0.977; evalue=5.48e-10; confidence=low |
| Rice | Os01g0815400- identity=79.2; qcov=0.273; evalue=3.38e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009052 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Secreted | 分泌到胞外 | 1.00000 | XP_057792244.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057792244.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057792244.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057792244.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057792244.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:71252682 |
CTG |
C |
2bp_deletion | frameshift_variant | 19 | B110,B12,B122,B140,B22,B27,B33,B35,B37,B46,B59,B9,B95,C39,C4,C60,C79,D10,D6 |
Chr2:71252688 |
A |
AC |
1bp_insertion | frameshift_variant | 1 | B84 |
Chr2:71252688 |
A |
AC |
1bp_insertion | CDS_variant | 1 | B84 |
Chr2:71252869 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B95,C14 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。