Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005248`

染色体: Chr02 坐标: 73633384-73638666 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005248`
名称	SmilChr02G005248
描述	wax ester synthase/diacylglycerol acyltransferase 4-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	73633384 - 73638666 / `+`

ID 对照

NCBI Gene ID	`LOC131009229`
GeneID	`131009229`
locus_tag	`-`
NCBI Name	`LOC131009229`
原始查询	`LOC131009229`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	wax ester synthase/diacylglycerol acyltransferase 4-like
产物	wax ester synthase/diacylglycerol acyltransferase 4-like
Arabidopsis	`AT3G49190` (AT3G49190) O-acyltransferase (WSD1-like) family protein [Source:NCBI gene (formerly Entrezgene);Acc:824080] identity=30; qcov=1.01; evalue=6.18e-58; confidence=low
Rice	`Os01g0681000` - identity=31.1; qcov=0.983; evalue=6.26e-61; confidence=low
GO	GO:0004144 (diacylglycerol O-acyltransferase activity); GO:0005886 (plasma membrane); GO:0019432 (triglyceride biosynthetic process); GO:0047196 (long-chain-alcohol O-fatty-acyltransferase activity)
KEGG	-
Pfam	PF03007 (WS_DGAT_cat); PF06974 (WS_DGAT_C)
InterPro	-
eggNOG	-
NR	GeneID:131009229

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057792476.1`
2	Endoplasmic reticulum membrane	内质网膜	1.00000	`XP_057792476.1`
3	Nucleus	细胞核	0.00000	`XP_057792476.1`
4	Chromosome	染色体	0.00000	`XP_057792476.1`
5	Centromere	着丝粒	0.00000	`XP_057792476.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:73636074`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B3,C38,C8
`Chr2:73636124`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B80
`Chr2:73636380`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B67,B75,C17,D9
`Chr2:73636403`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B107,B21,B55,C23,C41
`Chr2:73636489`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A7,B112,B139
`Chr2:73636503`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr2:73637190`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B46,C62
`Chr2:73637334`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B66,B95,C47,C57,C58
`Chr2:73637349`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B26,B5,B73,B97
`Chr2:73637433`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A2,B94
`Chr2:73637493`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	C18,C36,C64,C66
`Chr2:73637773`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B117

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792476.1

461 aa

230

461

WS_DGAT_cat

WS_DGAT_C

PF03007 WS_DGAT_cat 97-257 aa PF06974 WS_DGAT_C 311-452 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792476.1`	Pfam	`PF03007`	WS_DGAT_cat	Domain	97	257	8.5e-13	49.4	Wax ester synthase/diacylglycerol acyltransferase catalytic domain
`XP_057792476.1`	Pfam	`PF06974`	WS_DGAT_C	Domain	311	452	8.8e-42	143.3	WS/DGAT C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057936493.1
GTTATAAAAAGGAATAGACTCATAGAGATGAAAACAACCTATTTATATGAGCCTTAAAAAGAAAAATCTGAAATTATATATGCAGTAGTTGAGTCTCATTGGGCAGTAAAAACTAAAAAAAAATAAAAATGGAGGAGCATTATTCAGAGCCAGTTAGCCCAACTGGGCAATACTTCACTAGCTCAGTGATTTCAGTGAGTGTGATTGGTGTTCTTGAATCTGAGATCCCCATTGATAATTCTCACACTTTCTCTTTGCTC...

CDS

1 records

下载 CDS FASTA

LOC131009229
ATGGAGGAGCATTATTCAGAGCCAGTTAGCCCAACTGGGCAATACTTCACTAGCTCAGTGATTTCAGTGAGTGTGATTGGTGTTCTTGAATCTGAGATCCCCATTGATAATTCTCACACTTTCTCTTTGCTCAAAGATTTGTTTCTTCCCATCAACCCTCGTTTCTCCTCTCTCATGGTGAAGGACAAGAATGGAAAGAAACATTGGAAGAAGGTTGATGTGAAGCTCGAAGATCACTTGAATCTCCCAAAATTTCCGGC...

Protein

1 records

下载 Protein FASTA

XP_057792476.1
MEEHYSEPVSPTGQYFTSSVISVSVIGVLESEIPIDNSHTFSLLKDLFLPINPRFSSLMVKDKNGKKHWKKVDVKLEDHLNLPKFPAEKSPEFYEECLTDYLSRISMEEFPQSRPLWEIHIIQYPTKNAKGSVVFKLHHSLGDGFSLMGALLSCLQRADDPQIPLTLPSMIPTGHALGSGHGFCRRFSRVLSGVVNTVVDFGWSLLKSSVLEDHKSPVRSGEDGVEFRPITITTLTFSLDQIRQIKASLHVSINDVVCGV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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