当前解析结果
SmilChr02G005547| 统一新 Gene ID | SmilChr02G005547 |
|---|---|
| 名称 | SmilChr02G005547 |
| 描述 | protein JASON-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 75460086 - 75462745 / + |
| NCBI Gene ID | LOC131009508 |
|---|---|
| GeneID | 131009508 |
| locus_tag | - |
| NCBI Name | LOC131009508 |
| 原始查询 | LOC131009508 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein JASON-like |
| 产物 | protein JASON-like |
| Arabidopsis | AT2G30820 (AT2G30820)aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit [Source:NCBI gene (formerly Entrezgene);Acc:817633] identity=66.3; qcov=0.281; evalue=1.14e-35; confidence=weak |
| Rice | Os03g0777100- identity=58.7; qcov=0.337; evalue=1.41e-35; confidence=low |
| GO | GO:0007142 (male meiosis II) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009508 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057792870.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057792870.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057792870.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057792870.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057792870.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:75460351 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B136,B20,C44 |
Chr2:75460360 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A10,A15 |
Chr2:75460742 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A1,B4 |
Chr2:75461127 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,B13,B46 |
Chr2:75461140 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B136,B20,C44 |
Chr2:75461197 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A22,B105,B2,C51,D10 |
Chr2:75461268 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B64 |
Chr2:75461474 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B134,B28,B62,B76,C77 |
Chr2:75461478 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B53 |
Chr2:75461481 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C29 |
Chr2:75461529 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B93 |
Chr2:75461563 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A1,B4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。