当前解析结果
SmilChr02G003135| 统一新 Gene ID | SmilChr02G003135 |
|---|---|
| 名称 | SmilChr02G003135 |
| 描述 | uncharacterized SmilChr02G003135 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 52368541 - 52369111 / - |
| NCBI Gene ID | LOC131009712 |
|---|---|
| GeneID | 131009712 |
| locus_tag | - |
| NCBI Name | LOC131009712 |
| 原始查询 | LOC131009712 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box and associated interaction domains-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819978]; symbol=AT3G07870; hit=AT3G07870; species=arabidopsis; confidence=low |
| 产物 | F-box and associated interaction domains-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819978]; symbol=AT3G07870; hit=AT3G07870; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G07870 (AT3G07870)F-box and associated interaction domains-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819978] identity=39.7; qcov=0.459; evalue=1.65e-07; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009712 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.40000 | XP_057793106.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057793106.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057793106.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057793106.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057793106.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:52368617 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr2:52368625 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:52368667 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:52368747 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,C74 |
Chr2:52368868 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A1,A13,B132,C31,C53 |
Chr2:52368910 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:52368932 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr2:52369058 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:52369065 |
TAG |
T |
2bp_deletion | frameshift_variant | 1 | B34 |
Chr2:52369065 |
TAG |
T |
2bp_deletion | CDS_variant | 1 | B34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。