当前解析结果
SmilChr02G003754| 统一新 Gene ID | SmilChr02G003754 |
|---|---|
| 名称 | SmilChr02G003754 |
| 描述 | uncharacterized SmilChr02G003754 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 59173904 - 59174722 / + |
| NCBI Gene ID | LOC131009811 |
|---|---|
| GeneID | 131009811 |
| locus_tag | - |
| NCBI Name | LOC131009811 |
| 原始查询 | LOC131009811 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os11g0303800; species=rice; confidence=weak |
| 产物 | hit=Os11g0303800; species=rice; confidence=weak |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=26.2; qcov=0.463; evalue=6.61e-12; confidence=low |
| Rice | Os11g0303800- identity=23.3; qcov=1.01; evalue=6.81e-16; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009811 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057793201.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057793201.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057793201.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057793201.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057793201.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:59173934 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | A15,B14,C84 |
Chr2:59173934 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B14,C84 |
Chr2:59173941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A5,B127,B40 |
Chr2:59173944 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A15,B50,B84 |
Chr2:59173948 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B108,B50,C23,C57 |
Chr2:59173951 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:59173966 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:59173971 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B137,B6,C21 |
Chr2:59173974 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C29 |
Chr2:59173986 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C42,C86 |
Chr2:59174000 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr2:59174012 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B35,B48,B64,D8,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。