当前解析结果
SmilChr02G004719| 统一新 Gene ID | SmilChr02G004719 |
|---|---|
| 名称 | SmilChr02G004719 |
| 描述 | classical arabinogalactan protein 11-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 69448186 - 69448632 / - |
| NCBI Gene ID | LOC131009936 |
|---|---|
| GeneID | 131009936 |
| locus_tag | - |
| NCBI Name | LOC131009936 |
| 原始查询 | LOC131009936 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | classical arabinogalactan protein 11-like |
| 产物 | classical arabinogalactan protein 11-like |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009936 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057793317.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057793317.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057793317.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057793317.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057793317.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:69448270 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A2 |
Chr2:69448287 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr2:69448306 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A19,B103,C15,C27 |
Chr2:69448324 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr2:69448436 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | C16 |
Chr2:69448436 |
GC |
G |
1bp_deletion | CDS_variant | 1 | C16 |
Chr2:69448439 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C16 |
Chr2:69448477 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr2:69448494 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr2:69448500 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr2:69448546 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B132,B70,C17,C44,D8 |
Chr2:69448570 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A10,B120,B13,B19,B77 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。