Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G003315`

染色体: Chr02 坐标: 54399664-54404899 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G003315`
名称	SmilChr02G003315
描述	uncharacterized SmilChr02G003315
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	54399664 - 54404899 / `-`

ID 对照

NCBI Gene ID	`LOC131010293`
GeneID	`131010293`
locus_tag	`-`
NCBI Name	`LOC131010293`
原始查询	`LOC131010293`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	esterase/lipase/thioesterase family protein [Source:NCBI gene (formerly Entrezgene);Acc:826596]; symbol=AT4G10050; hit=AT4G10050; species=arabidopsis; confidence=high
产物	esterase/lipase/thioesterase family protein [Source:NCBI gene (formerly Entrezgene);Acc:826596]; symbol=AT4G10050; hit=AT4G10050; species=arabidopsis; confidence=high
Arabidopsis	`AT4G10050` (AT4G10050) esterase/lipase/thioesterase family protein [Source:NCBI gene (formerly Entrezgene);Acc:826596] identity=70.8; qcov=0.994; evalue=0; confidence=high
Rice	`Os04g0443500` - identity=74.8; qcov=0.865; evalue=4.99e-174; confidence=high
GO	GO:0006482 (protein demethylation); GO:0051723 (protein methylesterase activity)
KEGG	-
Pfam	PF00561 (Abhydrolase_1); PF00975 (Thioesterase); PF12146 (Hydrolase_4); PF12697 (Abhydrolase_6)
InterPro	-
eggNOG	-
NR	GeneID:131010293

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057793727.1`
2	Cytoplasm	细胞质	1.00000	`XP_057793728.1`
3	Nucleus	细胞核	0.20000	`XP_057793727.1`
4	Chromosome	染色体	0.00000	`XP_057793727.1`
5	Centromere	着丝粒	0.00000	`XP_057793727.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:54399889`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:54399890`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr2:54401923`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B114
`Chr2:54403663`	`GC`	`G`	1bp_deletion	frameshift_variant	1	B92
`Chr2:54403663`	`GC`	`G`	1bp_deletion	CDS_variant	1	B92
`Chr2:54404727`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B32

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057793727.1

359 aa

180

359

Abhydrolase_1

Hydrolase_4

Abhydrolase_6

PF00561 Abhydrolase_1 83-317 aa PF12146 Hydrolase_4 84-183 aa PF12697 Abhydrolase_6 85-324 aa

XP_057793728.1

348 aa

174

348

Abhydrolase_1

Hydrolase_4

Thioesterase

Abhydrolase_6

PF00561 Abhydrolase_1 83-317 aa PF12146 Hydrolase_4 84-183 aa PF00975 Thioesterase 85-172 aa PF12697 Abhydrolase_6 85-324 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057793727.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	83	317	2.5e-20	73.9	alpha/beta hydrolase fold
`XP_057793727.1`	Pfam	`PF12146`	Hydrolase_4	Domain	84	183	2.3e-12	47.5	Serine aminopeptidase, S33
`XP_057793727.1`	Pfam	`PF12697`	Abhydrolase_6	Domain	85	324	7.7e-26	92.8	Alpha/beta hydrolase family
`XP_057793728.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	83	317	2.3e-20	74.1	alpha/beta hydrolase fold
`XP_057793728.1`	Pfam	`PF12146`	Hydrolase_4	Domain	84	183	2.1e-12	47.6	Serine aminopeptidase, S33
`XP_057793728.1`	Pfam	`PF00975`	Thioesterase	Domain	85	172	7.5e-06	27.0	Thioesterase domain
`XP_057793728.1`	Pfam	`PF12697`	Abhydrolase_6	Domain	85	324	7e-26	92.9	Alpha/beta hydrolase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057937744.1
CAAAAAATAGCAGAGAATTAAAAGTTTCGCAGATTCTGTGAGTGATCGAAAAATGGAGAATTCATCATCATATCTAAGCTCGCTTCCAGAAGAGGATTCGCAAAATGGTGGAGCTGCCGCTCAGAGTGCTAGCAAATCGCCATCAGCTTTTTCTTCCAAGCCCGATCGTCCTCCAATTCAGACTTCATCACATAAATATGCACCTTTAGATTGGTCAGACTACTTTGACCAAGAAGATGATGTTCGCATCCCAGACTCAG...

XM_057937745.1
AAAAAATAGCAGAGAATTAAAAGTTTCGCAGATTCTGTGAGTGATCGAAAAATGGAGAATTCATCATCATATCTAAGCTCGCTTCCAGAAGAGGATTCGCAAAATGGTGGAGCTGCCGCTCAGAGTGCTAGCAAATCGCCATCAGCTTTTTCTTCCAAGCCCGATCGTCCTCCAATTCAGACTTCATCACATAAATATGCACCTTTAGATTGGTCAGACTACTTTGACCAAGAAGATGATGTTCGCATCCCAGACTCAGA...

CDS

2 records

下载 CDS FASTA

LOC131010293
ATGGAGAATTCATCATCATATCTAAGCTCGCTTCCAGAAGAGGATTCGCAAAATGGTGGAGCTGCCGCTCAGAGTGCTAGCAAATCGCCATCAGCTTTTTCTTCCAAGCCCGATCGTCCTCCAATTCAGACTTCATCACATAAATATGCACCTTTAGATTGGTCAGACTACTTTGACCAAGAAGATGATGTTCGCATCCCAGACTCAGAAAATGTATTTCACTTCTATAAGGCAGGAAATGAGGGTCCAGTTGTTTTATG...

Protein

2 records

下载 Protein FASTA

XP_057793727.1
MENSSSYLSSLPEEDSQNGGAAAQSASKSPSAFSSKPDRPPIQTSSHKYAPLDWSDYFDQEDDVRIPDSENVFHFYKAGNEGPVVLCLHGGGYSGLSFALSARQIKEKARVVALDLRGHGKSSTENDLDLSIETLCNDVVAVVKIMYGDSPPAIVMIGHSMGGALAVNIAAKKVLPSLAALVVVDVVEGTAMASLVHMQQILSNRMQHFSSIEKAIEWNIKGGSLRNVDSARVSIPSTLIYDDSKKCYTHRARLVETEQY...

XP_057793728.1
MENSSSYLSSLPEEDSQNGGAAAQSASKSPSAFSSKPDRPPIQTSSHKYAPLDWSDYFDQEDDVRIPDSENVFHFYKAGNEGPVVLCLHGGGYSGLSFALSARQIKEKARVVALDLRGHGKSSTENDLDLSIETLCNDVVAVVKIMYGDSPPAIVMIGHSMGGALAVNIAAKKVLPSLAALVVVDVVEGTAMASLVHMQQILSNRMQHFSSIEKAIEWNIKGGSLRNVDSARVSIPSTLIYDDSKKCYTHRARLVETEQY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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