Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G003631`

染色体: Chr02 坐标: 57650555-57656864 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G003631`
名称	SmilChr02G003631
描述	purple acid phosphatase 4-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	57650555 - 57656864 / `-`

ID 对照

NCBI Gene ID	`LOC131010589`
GeneID	`131010589`
locus_tag	`-`
NCBI Name	`LOC131010589`
原始查询	`LOC131010589`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	purple acid phosphatase 4-like
产物	purple acid phosphatase 4-like
Arabidopsis	`AT1G25230` (AT1G25230) Calcineurin-like metallo-phosphoesterase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839105] identity=60.9; qcov=0.959; evalue=6.65e-144; confidence=high
Rice	`Os03g0238600` (OsPAP3c) - identity=64.1; qcov=0.937; evalue=3.05e-139; confidence=high
GO	GO:0003993 (acid phosphatase activity); GO:0008198 (ferrous iron binding); GO:0008199 (ferric iron binding)
KEGG	smil00740 (Riboflavin metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil04142 (Lysosome biogenesis - Salvia miltiorrhiza (redroot sage))
Pfam	PF00149 (Metallophos)
InterPro	-
eggNOG	-
NR	GeneID:131010589

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	1.00000	`XP_057794158.1`
2	Cytoplasm	细胞质	0.40000	`XP_057794159.1`
3	Nucleus	细胞核	0.00000	`XP_057794158.1`
4	Chromosome	染色体	0.00000	`XP_057794158.1`
5	Centromere	着丝粒	0.00000	`XP_057794158.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:57650841`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B55
`Chr2:57652934`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C36
`Chr2:57653177`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B130
`Chr2:57653177`	`TC`	`T`	1bp_deletion	CDS_variant	1	B130
`Chr2:57654062`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A5,D10
`Chr2:57656247`	`AC`	`A`	1bp_deletion	frameshift_variant	1	B13
`Chr2:57656247`	`AC`	`A`	1bp_deletion	CDS_variant	1	B13

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057794158.1

330 aa

165

330

Metallophos

PF00149 Metallophos 43-251 aa

XP_057794159.1

315 aa

158

315

Metallophos

PF00149 Metallophos 28-236 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057794158.1`	Pfam	`PF00149`	Metallophos	Domain	43	251	1.3e-18	68.9	Calcineurin-like phosphoesterase
`XP_057794159.1`	Pfam	`PF00149`	Metallophos	Domain	28	236	1.2e-18	69.0	Calcineurin-like phosphoesterase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057938176.1
AATTGATTAGAGCTGGGCCATATACTCACTATCGCAATAATGTGGATATTTTCAGATTTCATGATACATGCATAGTACATTTTTATGATCAAAAGGTTAAAATAATTCTTCATTTTTATTTTAAATAAAAATTCTCACTTGAATATATACATAATACTTAAAGATGTAGTAATTATAATATTTGGAATTGTTAATAGGGGTTAGCGAATGTAACTACATAATATATATGTGGTACATATGATATCTACAATAAAATGAAA...

XM_057938175.1
GAATATAAGATTACAAAAATGGGAGCAACAACATTATCCAAGTGTGGATCGGAAGCAATATATCTTGATTTGGTAAGTTGTGTGGTCACTGCCCATCCTCTTCTCAACCATATTTAATTTCGTTAATTATATATATACAGTCACAGATTGTAGCTATATATATGTTGAAAATCGATCTCCACCATGCATCACATAATATTGGTAGCTCTAATAACAAGACATGATGATGAGAATGAGATTGAGAATTGTTGCTGTTGTAG...

CDS

2 records

下载 CDS FASTA

LOC131010589
ATGATGATGAGAATGAGATTGAGAATTGTTGCTGTTGTAGTGGTAATGGTAGTCGTTGATGTGCATGTGAGTAAGGGTGAGTTTGAACGCTTCGAAGCCTCAACCAAAGCAGACGGCTCCATCACTGCTTTGGTCATCGGAGATTGGGGAAGAAAAGGCCAATACAACCAGTCGCTACTTGCCACCCAGATGGGTAAGACTGCAGAGAAGATAAACATTGATTTTACAATTTCAACTGGAGACAATTTTTACCCCGGTGG...

LOC131010589
ATGGTAGTCGTTGATGTGCATGTGAGTAAGGGTGAGTTTGAACGCTTCGAAGCCTCAACCAAAGCAGACGGCTCCATCACTGCTTTGGTCATCGGAGATTGGGGAAGAAAAGGCCAATACAACCAGTCGCTACTTGCCACCCAGATGGGTAAGACTGCAGAGAAGATAAACATTGATTTTACAATTTCAACTGGAGACAATTTTTACCCCGGTGGACTAACAGATGCAAATGATGAAGCCTTTTATCAATCATTTTATGA...

Protein

2 records

下载 Protein FASTA

XP_057794158.1
MMMRMRLRIVAVVVVMVVVDVHVSKGEFERFEASTKADGSITALVIGDWGRKGQYNQSLLATQMGKTAEKINIDFTISTGDNFYPGGLTDANDEAFYQSFYDIYNSPALNKMWYTVLGNHDYRGDALAQLSPILKARDNRWFCLKSFILNADIAEFFFIDTTPLQDKYFTDPEDQVYDWRGVLPRDKYISTLLQDLDVALRESHATWKIVAGHHTIKSASIHGNTQELVQKLLPILEANNVDIYINGHDHCLQHISSSDS...

XP_057794159.1
MVVVDVHVSKGEFERFEASTKADGSITALVIGDWGRKGQYNQSLLATQMGKTAEKINIDFTISTGDNFYPGGLTDANDEAFYQSFYDIYNSPALNKMWYTVLGNHDYRGDALAQLSPILKARDNRWFCLKSFILNADIAEFFFIDTTPLQDKYFTDPEDQVYDWRGVLPRDKYISTLLQDLDVALRESHATWKIVAGHHTIKSASIHGNTQELVQKLLPILEANNVDIYINGHDHCLQHISSSDSPLQFITSGAGSKAWR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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