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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr02G003646

染色体: Chr02 坐标: 57829536-57840594 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr02G003646
名称SmilChr02G003646
描述uncharacterized SmilChr02G003646
染色体 / SeqIDChr02 / NC_080388.1
坐标与链方向57829536 - 57840594 / -

ID 对照

NCBI Gene IDLOC131010603
GeneID131010603
locus_tag-
NCBI NameLOC131010603
原始查询LOC131010603

查看完整 ID 对照表

功能注释

来源GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述FAM91 carboxy-terminus protein [Source:NCBI gene (formerly Entrezgene);Acc:840411]; symbol=AT1G35220; hit=AT1G35220; species=arabidopsis; confidence=high
产物FAM91 carboxy-terminus protein [Source:NCBI gene (formerly Entrezgene);Acc:840411]; symbol=AT1G35220; hit=AT1G35220; species=arabidopsis; confidence=high
ArabidopsisAT1G35220 (AT1G35220)
FAM91 carboxy-terminus protein [Source:NCBI gene (formerly Entrezgene);Acc:840411]
identity=67.2; qcov=1.01; evalue=0; confidence=high
RiceOs01g0303200
-
identity=60.8; qcov=1.01; evalue=0; confidence=high
GO-
KEGG-
PfamPF14647 (FAM91_N); PF14648 (FAM91_C)
InterPro-
eggNOG-
NRGeneID:131010603

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Cytosol 细胞质基质 1.00000 XP_057794184.1
2 Cytoplasm 细胞质 1.00000 XP_057794187.1
3 Nucleus 细胞核 0.20000 XP_057794184.1
4 Golgi apparatus 高尔基体 0.20000 XP_057794184.1
5 Trans-golgi network Trans-golgi network 0.20000 XP_057794184.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr2:57830314 G A EMS_canonical_SNV CDS_variant 1 C71
Chr2:57830332 C T EMS_canonical_SNV CDS_variant 3 B130,C77,C85
Chr2:57830355 G A EMS_canonical_SNV CDS_variant 3 B130,B48,C77
Chr2:57831189 C T EMS_canonical_SNV CDS_variant 4 A11,B104,B17,C48
Chr2:57831332 C T EMS_canonical_SNV CDS_variant 2 B82,C5
Chr2:57831884 G A EMS_canonical_SNV CDS_variant 1 B75
Chr2:57832049 C T EMS_canonical_SNV CDS_variant 2 A23,B20
Chr2:57832100 G A EMS_canonical_SNV CDS_variant 3 B64,C49,D8
Chr2:57832211 G A EMS_canonical_SNV CDS_variant 3 B64,C49,D8
Chr2:57832221 G A EMS_canonical_SNV CDS_variant 1 C36
Chr2:57832328 C T EMS_canonical_SNV CDS_variant 2 A23,B20
Chr2:57832427 G A EMS_canonical_SNV CDS_variant 3 A16,B47,D4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057794184.1
987 aa
N
1
494
987
FAM91_N
FAM91_C
FAM91_C
FAM91_C
C
PF14647 FAM91_N 17-307 aa PF14648 FAM91_C 369-458 aa PF14648 FAM91_C 541-759 aa PF14648 FAM91_C 765-846 aa
XP_057794185.1
987 aa
N
1
494
987
FAM91_N
FAM91_C
FAM91_C
FAM91_C
C
PF14647 FAM91_N 17-307 aa PF14648 FAM91_C 369-458 aa PF14648 FAM91_C 541-759 aa PF14648 FAM91_C 765-846 aa
XP_057794186.1
987 aa
N
1
494
987
FAM91_N
FAM91_C
FAM91_C
FAM91_C
C
PF14647 FAM91_N 17-307 aa PF14648 FAM91_C 369-458 aa PF14648 FAM91_C 541-759 aa PF14648 FAM91_C 765-846 aa
XP_057794187.1
835 aa
N
1
418
835
FAM91_N
FAM91_C
FAM91_C
FAM91_C
C
PF14647 FAM91_N 4-155 aa PF14648 FAM91_C 217-306 aa PF14648 FAM91_C 389-607 aa PF14648 FAM91_C 613-694 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057794184.1 Pfam PF14647 FAM91_N Family 17 307 1.9e-93 313.7 FAM91 N-terminus
XP_057794184.1 Pfam PF14648 FAM91_C Family 369 458 2.6e-66 225.0 FAM91 C-terminus
XP_057794184.1 Pfam PF14648 FAM91_C Family 541 759 2.6e-66 225.0 FAM91 C-terminus
XP_057794184.1 Pfam PF14648 FAM91_C Family 765 846 2.6e-66 225.0 FAM91 C-terminus
XP_057794185.1 Pfam PF14647 FAM91_N Family 17 307 1.9e-93 313.7 FAM91 N-terminus
XP_057794185.1 Pfam PF14648 FAM91_C Family 369 458 2.6e-66 225.0 FAM91 C-terminus
XP_057794185.1 Pfam PF14648 FAM91_C Family 541 759 2.6e-66 225.0 FAM91 C-terminus
XP_057794185.1 Pfam PF14648 FAM91_C Family 765 846 2.6e-66 225.0 FAM91 C-terminus
XP_057794186.1 Pfam PF14647 FAM91_N Family 17 307 1.9e-93 313.7 FAM91 N-terminus
XP_057794186.1 Pfam PF14648 FAM91_C Family 369 458 2.6e-66 225.0 FAM91 C-terminus
XP_057794186.1 Pfam PF14648 FAM91_C Family 541 759 2.6e-66 225.0 FAM91 C-terminus
XP_057794186.1 Pfam PF14648 FAM91_C Family 765 846 2.6e-66 225.0 FAM91 C-terminus
XP_057794187.1 Pfam PF14647 FAM91_N Family 4 155 2.4e-37 129.5 FAM91 N-terminus
XP_057794187.1 Pfam PF14648 FAM91_C Family 217 306 1.2e-66 226.1 FAM91 C-terminus
XP_057794187.1 Pfam PF14648 FAM91_C Family 389 607 1.2e-66 226.1 FAM91 C-terminus
XP_057794187.1 Pfam PF14648 FAM91_C Family 613 694 1.2e-66 226.1 FAM91 C-terminus

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA
XM_057938203.1
GTGCTAATACCATTTTTTTAAAAAAAATAAAGAAAAAATAATACGCGCAAGTTGCAACAGCAAATCTGAGTTTGTCTAAAAGACTGTTTGATCCTCGTCGCAGCAGCTCAATCAGTCGGTGCCGCTCCTTCGCTCCAATTCTTCTGCATTCATGCCCAGATTTGAAGCCCTAGTTTGATCCCGCTTCTCGCCTCTGTTTTGATAGAATTTAGTTTACAGAGATATTGGTGATCTTACACAATGCAGCGTCCGCCGGCGAC...
XM_057938201.1
CTAATACCATTTTTTTAAAAAAAATAAAGAAAAAATAATACGCGCAAGTTGCAACAGCAAATCTGAGTTTGTCTAAAAGACTGTTTGATCCTCGTCGCAGCAGCTCAATCAGTCGGTGCCGCTCCTTCGCTCCAATTCTTCTGCATTCATGCCCAGATTTGAAGCCCTAGTTTGATCCCGCTTCTCGCCTCTGTTTTGATAGAATTTAGTTTACAGAGATATTGGTGATCTTACACAATGCAGCGTCCGCCGGCGACGAT...

CDS

4 records

下载 CDS FASTA
LOC131010603
ATGCAGCGTCCGCCGGCGACGATGGAGGAACAGTTGATGCTAAAAGCAATTGCAGAAGAATGCACCTGGGAGAGCCTGCCCAAGCGCCTTCAGTCCACCTTGAATTCCAAGGAAGAATGGCATCGAAGGATAATTGATCACTGCATCAAGAAAAGACTCCTCTGGAACACTTGTTTTGCACGCAAAGTGTGCAAAGAAAGTGAATACTATGAGGAAATGATGCGTTATCTACGGAGGAATCTAGCGCTGTATCCCTACCA...
LOC131010603
ATGCAGCGTCCGCCGGCGACGATGGAGGAACAGTTGATGCTAAAAGCAATTGCAGAAGAATGCACCTGGGAGAGCCTGCCCAAGCGCCTTCAGTCCACCTTGAATTCCAAGGAAGAATGGCATCGAAGGATAATTGATCACTGCATCAAGAAAAGACTCCTCTGGAACACTTGTTTTGCACGCAAAGTGTGCAAAGAAAGTGAATACTATGAGGAAATGATGCGTTATCTACGGAGGAATCTAGCGCTGTATCCCTACCA...

Protein

4 records

下载 Protein FASTA
XP_057794184.1
MQRPPATMEEQLMLKAIAEECTWESLPKRLQSTLNSKEEWHRRIIDHCIKKRLLWNTCFARKVCKESEYYEEMMRYLRRNLALYPYHLAEYVCRVMRVSPFKYYCDILFEVMKNEQPYDSIPNFSAADALRIAGIGRNEFIDIMNKCRSKKIMWKLNKSIAKELLPIEPVDFVIEPWWGVCLVNFTLEEFKKLSEEEMATIDKICKEEANSFILFDPEIIKGLYRRGLVYFDVPVYPDDRFKVSRLEGFVSNREQSYEDP...
XP_057794185.1
MQRPPATMEEQLMLKAIAEECTWESLPKRLQSTLNSKEEWHRRIIDHCIKKRLLWNTCFARKVCKESEYYEEMMRYLRRNLALYPYHLAEYVCRVMRVSPFKYYCDILFEVMKNEQPYDSIPNFSAADALRIAGIGRNEFIDIMNKCRSKKIMWKLNKSIAKELLPIEPVDFVIEPWWGVCLVNFTLEEFKKLSEEEMATIDKICKEEANSFILFDPEIIKGLYRRGLVYFDVPVYPDDRFKVSRLEGFVSNREQSYEDP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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