当前解析结果
SmilChr02G003653| 统一新 Gene ID | SmilChr02G003653 |
|---|---|
| 名称 | SmilChr02G003653 |
| 描述 | uncharacterized SmilChr02G003653 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 57913076 - 57917868 / - |
| NCBI Gene ID | LOC131010610 |
|---|---|
| GeneID | 131010610 |
| locus_tag | - |
| NCBI Name | LOC131010610 |
| 原始查询 | LOC131010610 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | TRAF-type zinc finger-like protein [Source:NCBI gene (formerly Entrezgene);Acc:837524]; symbol=AT1G09920; hit=AT1G09920; species=arabidopsis; confidence=high |
| 产物 | TRAF-type zinc finger-like protein [Source:NCBI gene (formerly Entrezgene);Acc:837524]; symbol=AT1G09920; hit=AT1G09920; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G09920 (AT1G09920)TRAF-type zinc finger-like protein [Source:NCBI gene (formerly Entrezgene);Acc:837524] identity=65.8; qcov=0.941; evalue=6.09e-92; confidence=high |
| Rice | Os03g0356652- identity=53.9; qcov=0.946; evalue=1.93e-66; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010610 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.60000 | XP_057794200.1 |
| 2 | Mitochondrion | 线粒体 | 0.40000 | XP_057794200.1 |
| 3 | Mitochondrion membrane | 线粒体膜 | 0.40000 | XP_057794200.1 |
| 4 | Mitochondrion outer membrane | 线粒体外膜 | 0.40000 | XP_057794200.1 |
| 5 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057794200.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:57913400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,B44,C57 |
Chr2:57913502 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:57915055 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B103 |
Chr2:57915056 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:57915139 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr2:57915363 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B16,B69,B73,C50 |
Chr2:57915366 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B59,B64,C49,D8 |
Chr2:57916190 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A3,B17,B24,B33,C48 |
Chr2:57916274 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。