Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G003728`

染色体: Chr02 坐标: 58906516-58914327 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G003728`
名称	SmilChr02G003728
描述	uncharacterized SmilChr02G003728
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	58906516 - 58914327 / `-`

ID 对照

NCBI Gene ID	`LOC131010692`
GeneID	`131010692`
locus_tag	`-`
NCBI Name	`LOC131010692`
原始查询	`LOC131010692`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	CW7 [Source:NCBI gene (formerly Entrezgene);Acc:842242]; symbol=CW7; hit=AT1G59520; species=arabidopsis; confidence=high
产物	CW7 [Source:NCBI gene (formerly Entrezgene);Acc:842242]; symbol=CW7; hit=AT1G59520; species=arabidopsis; confidence=high
Arabidopsis	`AT1G59520` (CW7) CW7 [Source:NCBI gene (formerly Entrezgene);Acc:842242] identity=66.8; qcov=1.01; evalue=1.03e-162; confidence=high
Rice	`Os04g0183100` - identity=57.7; qcov=1.01; evalue=1.93e-145; confidence=high
GO	-
KEGG	-
Pfam	PF09741 (DUF2045)
InterPro	-
eggNOG	-
NR	GeneID:131010692

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.80000	`XP_057794336.1`
2	Golgi apparatus	高尔基体	0.20000	`XP_057794336.1`
3	Lipid droplet	脂滴	0.20000	`XP_057794339.1`
4	Nucleus	细胞核	0.00000	`XP_057794336.1`
5	Chromosome	染色体	0.00000	`XP_057794336.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:58906860`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C78,D8
`Chr2:58906904`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C4
`Chr2:58906956`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A9,B121,B16,C75,D1
`Chr2:58908820`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B131,B9,C67,C83
`Chr2:58914050`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B45

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057794336.1

393 aa

196

393

DUF2045

PF09741 DUF2045 44-306 aa

XP_057794338.1

371 aa

186

371

DUF2045

PF09741 DUF2045 44-306 aa

XP_057794339.1

353 aa

176

353

DUF2045

PF09741 DUF2045 4-266 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057794336.1`	Pfam	`PF09741`	DUF2045	Family	44	306	3.8e-77	259.5	Uncharacterized conserved protein (DUF2045)
`XP_057794338.1`	Pfam	`PF09741`	DUF2045	Family	44	306	3.1e-77	259.8	Uncharacterized conserved protein (DUF2045)
`XP_057794339.1`	Pfam	`PF09741`	DUF2045	Family	4	266	2.8e-77	260.0	Uncharacterized conserved protein (DUF2045)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057938353.1
GGGCTTAATTTGTTTTGTTTTTAGAGTGATTTTGTTGAGAACGCTGCGTTTCTTCCGGAAACGGTGGCGTTCCGTGCACAGCACCTCGTTTTATTTTCATCGAAAGCCGAGTGAGTGACTGCAATTATTGTAGAAGAAGATTACACGTGGAATGCGGTGAAATCAAGTAGAATTTGGTTTTCCCTCAAAATTTCTTAGATATAAACAGTCAAAAATAGTGCTTCCGAGTAAGACTTTCTCCACTTGGTGTTAAGATGCTC...

XM_057938355.1
TCCGGAAACGGTGGCGTTCCGTGCACAGCACCTCGTTTTATTTTCATCGAAAGCCGAGTGAGTGACTGCAATTATTGTAGAAGAAGATTACACGTGGAATGCGGTGAAATCAAGTAGAATTTGGTTTTCCCTCAAAATTTCTTAGATATAAACAGTCAAAAATAGTGCTTCCGAGTAAGACTTTCTCCACTTGGTGTTAAGATGCTCGGTGATAAATCGCTAATCCTTCCTAGGTACGAGCTGTTGAGTATCATTAGGAA...

CDS

3 records

下载 CDS FASTA

LOC131010692
ATGCTCGGTGATAAATCGCTAATCCTTCCTAGGTACGAGCTGTTGAGTATCATTAGGAAACATTCAAAGTCGATTGGACAAACTATATTAGATGAGGAGGAGTCACAAGATGATTTGGAAATGGACCCTAGCTTCTGGCATAACGTCATTGACTCGTATTTTGTTCGCAGTAGGGAGTCCAGGGGGCGTGAGGATGATGATCTTATATTCTTTGTTAGAAAAATGAATTTGGAGTCGCAAAGATCCAATGGCGACGCAGA...

Protein

3 records

下载 Protein FASTA

XP_057794336.1
MLGDKSLILPRYELLSIIRKHSKSIGQTILDEEESQDDLEMDPSFWHNVIDSYFVRSRESRGREDDDLIFFVRKMNLESQRSNGDAESNSPYFVRRWAPELDELVGGNSLIIDWRRSFYLNLIAHTSFSVTVAICSHQVIRQYQQGETLSPIYKVVKTVYASPSRINFHLDSRKEVETTPAYPDICFAVDDFDSTFDSVVLTDPDHCYCVLLNAHDGAAFPHERKTEQANSDVSSSENVTSHGKTKNSKITLFSGFVSYQ...

XP_057794338.1
MLGDKSLILPRYELLSIIRKHSKSIGQTILDEEESQDDLEMDPSFWHNVIDSYFVRSRESRGREDDDLIFFVRKMNLESQRSNGDAESNSPYFVRRWAPELDELVGGNSLIIDWRRSFYLNLIAHTSFSVTVAICSHQVIRQYQQGETLSPIYKVVKTVYASPSRINFHLDSRKEVETTPAYPDICFAVDDFDSTFDSVVLTDPDHCYCVLLNAHDGAAFPHERKTEQANSDVSSSENVTSHGKTKNSKITLFSGFVSYQ...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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