当前解析结果
SmilChr02G003858| 统一新 Gene ID | SmilChr02G003858 |
|---|---|
| 名称 | SmilChr02G003858 |
| 描述 | uncharacterized SmilChr02G003858 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 60369218 - 60372493 / - |
| NCBI Gene ID | LOC131010799 |
|---|---|
| GeneID | 131010799 |
| locus_tag | - |
| NCBI Name | LOC131010799 |
| 原始查询 | LOC131010799 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | SPla/RYanodine receptor (SPRY) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:826007]; symbol=AT4G06536; hit=AT4G06536; species=arabidopsis; confidence=low |
| 产物 | SPla/RYanodine receptor (SPRY) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:826007]; symbol=AT4G06536; hit=AT4G06536; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G06536 (AT4G06536)SPla/RYanodine receptor (SPRY) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:826007] identity=50.9; qcov=0.36; evalue=5.56e-50; confidence=low |
| Rice | Os02g0614700- identity=48.8; qcov=0.345; evalue=7.18e-47; confidence=low |
| GO | GO:0098609 (cell-cell adhesion) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010799 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057794443.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057794443.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057794443.1 |
| 4 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057794443.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057794443.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:60369598 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B107,B140,B43 |
Chr2:60369636 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:60371505 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B111,B42,B43,B98,C82 |
Chr2:60371587 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B18 |
Chr2:60371702 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B31,C81 |
Chr2:60371843 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A7 |
Chr2:60371846 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A11,B49,B60,B79,C27 |
Chr2:60371949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr2:60371999 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,B54 |
Chr2:60372009 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A24,A7,B108,B7,D5 |
Chr2:60372018 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:60372193 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B111,B42,B43,B98,C82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。