当前解析结果
SmilChr02G003914| 统一新 Gene ID | SmilChr02G003914 |
|---|---|
| 名称 | SmilChr02G003914 |
| 描述 | BRI1 kinase inhibitor 1 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 61234002 - 61235262 / - |
| NCBI Gene ID | LOC131010855 |
|---|---|
| GeneID | 131010855 |
| locus_tag | - |
| NCBI Name | LOC131010855 |
| 原始查询 | LOC131010855 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | BRI1 kinase inhibitor 1 |
| 产物 | BRI1 kinase inhibitor 1 |
| Arabidopsis | AT5G42750 (BKI1)BRI1 kinase inhibitor 1 [Source:NCBI gene (formerly Entrezgene);Acc:834284] identity=40.7; qcov=1.17; evalue=2.64e-31; confidence=medium |
| Rice | Os09g0459500 (BIP119)- identity=59.6; qcov=0.174; evalue=3.67e-11; confidence=weak |
| GO | GO:0005886 (plasma membrane); GO:0019210 (kinase inhibitor activity) |
| KEGG | smil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF30362 (MAKR5_C); PF30743 (BKI1) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010855 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057794516.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057794516.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057794516.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057794516.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057794516.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:61234133 |
CAG |
C |
2bp_deletion | frameshift_variant | 2 | B29,B35 |
Chr2:61234133 |
CAG |
C |
2bp_deletion | CDS_variant | 2 | B29,B35 |
Chr2:61234136 |
C |
CA |
1bp_insertion | frameshift_variant | 2 | B29,B35 |
Chr2:61234136 |
C |
CA |
1bp_insertion | CDS_variant | 2 | B29,B35 |
Chr2:61234144 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B29,B35,B96 |
Chr2:61234185 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B96 |
Chr2:61234219 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B61 |
Chr2:61234222 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A18,B96,C5 |
Chr2:61234228 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B124,B61,B75 |
Chr2:61234234 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:61234243 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B34 |
Chr2:61234251 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,B96,C5 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057794516.1PF30743
BKI1 31-295 aa
PF30362
MAKR5_C 149-290 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057794516.1 |
Pfam | PF30743 |
BKI1 | Family | 31 | 295 | 6.7e-104 | 347.9 | BRI1 kinase inhibitor 1 |
XP_057794516.1 |
Pfam | PF30362 |
MAKR5_C | Domain | 149 | 290 | 1.7e-08 | 35.2 | Membrane-associated kinase regulator 5 helix |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。