当前解析结果
SmilChr02G004071| 统一新 Gene ID | SmilChr02G004071 |
|---|---|
| 名称 | SmilChr02G004071 |
| 描述 | uncharacterized SmilChr02G004071 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 62988008 - 62990987 / - |
| NCBI Gene ID | LOC131011004 |
|---|---|
| GeneID | 131011004 |
| locus_tag | - |
| NCBI Name | LOC131011004 |
| 原始查询 | LOC131011004 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | inner membrane localized protein [Source:NCBI gene (formerly Entrezgene);Acc:840894]; symbol=AT1G42960; hit=AT1G42960; species=arabidopsis; confidence=high |
| 产物 | inner membrane localized protein [Source:NCBI gene (formerly Entrezgene);Acc:840894]; symbol=AT1G42960; hit=AT1G42960; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G42960 (AT1G42960)inner membrane localized protein [Source:NCBI gene (formerly Entrezgene);Acc:840894] identity=57.5; qcov=0.927; evalue=2.43e-53; confidence=high |
| Rice | Os12g0583400- identity=41.5; qcov=0.57; evalue=1.41e-10; confidence=low |
| GO | GO:0009535 (chloroplast thylakoid membrane); GO:0009706 (chloroplast inner membrane) |
| KEGG | - |
| Pfam | PF27515 (Ssl2009_C) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011004 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057794720.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057794720.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 0.80000 | XP_057794720.1 |
| 4 | Chloroplast membrane | 叶绿体膜 | 0.20000 | XP_057794720.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057794720.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057794720.1PF27515
Ssl2009_C 115-147 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057794720.1 |
Pfam | PF27515 |
Ssl2009_C | Domain | 115 | 147 | 3.3e-10 | 40.5 | Ssl2009 C-terminal domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。