当前解析结果
SmilChr02G004097| 统一新 Gene ID | SmilChr02G004097 |
|---|---|
| 名称 | SmilChr02G004097 |
| 描述 | uncharacterized SmilChr02G004097 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 63277820 - 63278786 / + |
| NCBI Gene ID | LOC131011027 |
|---|---|
| GeneID | 131011027 |
| locus_tag | - |
| NCBI Name | LOC131011027 |
| 原始查询 | LOC131011027 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0512900; species=rice; confidence=medium |
| 产物 | hit=Os08g0512900; species=rice; confidence=medium |
| Arabidopsis | AT2G33585 (AT2G33585)subtilisin-like protease [Source:NCBI gene (formerly Entrezgene);Acc:817924] identity=72.9; qcov=1; evalue=1.33e-47; confidence=medium |
| Rice | Os08g0512900- identity=76.3; qcov=0.969; evalue=5.52e-50; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011027 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057794744.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057794744.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.80000 | XP_057794745.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057794744.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057794744.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:63278132 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr2:63278149 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B84 |
Chr2:63278185 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A2,B10,B136,B84 |
Chr2:63278190 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B1,B12,B131,B86,C51 |
Chr2:63278224 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A2,B10,B66,B84 |
Chr2:63278226 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B10,B66,B84 |
Chr2:63278244 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A2,B10,B84 |
Chr2:63278251 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A2,B10,B84 |
Chr2:63278253 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A2,B10,B84 |
Chr2:63278261 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A2,B10 |
Chr2:63278380 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr2:63278421 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A8,C47 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。