当前解析结果
SmilChr02G000764| 统一新 Gene ID | SmilChr02G000764 |
|---|---|
| 名称 | SmilChr02G000764 |
| 描述 | uncharacterized SmilChr02G000764 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 12444913 - 12446169 / - |
| NCBI Gene ID | LOC131011243 |
|---|---|
| GeneID | 131011243 |
| locus_tag | - |
| NCBI Name | LOC131011243 |
| 原始查询 | LOC131011243 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:828310]; symbol=AT4G22190; hit=AT4G22190; species=arabidopsis; confidence=high |
| 产物 | serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:828310]; symbol=AT4G22190; hit=AT4G22190; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G22190 (AT4G22190)serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:828310] identity=46.2; qcov=1.12; evalue=3.15e-67; confidence=high |
| Rice | Os11g0497350- identity=35.4; qcov=0.956; evalue=4.17e-22; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011243 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057795014.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057795014.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057795014.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057795014.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057795014.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:12445132 |
T |
TC |
1bp_insertion | frameshift_variant | 2 | A8,C4 |
Chr2:12445132 |
T |
TC |
1bp_insertion | CDS_variant | 2 | A8,C4 |
Chr2:12445196 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr2:12445545 |
GCT |
G |
2bp_deletion | frameshift_variant | 5 | A10,B103,B118,B139,C81 |
Chr2:12445545 |
GCT |
G |
2bp_deletion | CDS_variant | 5 | A10,B103,B118,B139,C81 |
Chr2:12445550 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
Chr2:12445788 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr2:12445791 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。