当前解析结果
SmilChr01G004754| 统一新 Gene ID | SmilChr01G004754 |
|---|---|
| 名称 | SmilChr01G004754 |
| 描述 | uncharacterized SmilChr01G004754 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 65743837 - 65744217 / + |
| NCBI Gene ID | LOC131011709 |
|---|---|
| GeneID | 131011709 |
| locus_tag | - |
| NCBI Name | LOC131011709 |
| 原始查询 | LOC131011709 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3771478]; symbol=AT5G50175; hit=AT5G50175; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3771478]; symbol=AT5G50175; hit=AT5G50175; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G50175 (AT5G50175)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3771478] identity=47.1; qcov=0.81; evalue=8.28e-18; confidence=low |
| Rice | Os12g0295600- identity=44.6; qcov=0.587; evalue=4.93e-10; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011709 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057795494.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057795494.1 |
| 3 | Chloroplast | 叶绿体 | 0.20000 | XP_057795494.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057795494.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057795494.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:65743920 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A23,B41,C11,C40,C69 |
Chr1:65743922 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr1:65743969 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B122,C86 |
Chr1:65743971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:65744043 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr1:65744044 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr1:65744091 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B32,B87,C36,C59 |
Chr1:65744097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr1:65744100 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B4,C36,D6 |
Chr1:65744123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C10,C54 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。