Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002759`

染色体: Chr02 坐标: 47631726-47637556 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002759`
名称	SmilChr02G002759
描述	ACT domain-containing protein ACR3
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	47631726 - 47637556 / `-`

ID 对照

NCBI Gene ID	`LOC131011789`
GeneID	`131011789`
locus_tag	`-`
NCBI Name	`LOC131011789`
原始查询	`LOC131011789`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ACT domain-containing protein ACR3
产物	ACT domain-containing protein ACR3
Arabidopsis	`AT1G76990` (ACR3) ACT domain repeat 3 [Source:NCBI gene (formerly Entrezgene);Acc:844035] identity=72.5; qcov=1.02; evalue=0; confidence=high
Rice	`Os02g0555600` - identity=55.9; qcov=1.1; evalue=1.21e-155; confidence=high
GO	-
KEGG	-
Pfam	PF01842 (ACT); PF26956 (ACT_ACR_D1)
InterPro	-
eggNOG	-
NR	GeneID:131011789

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057795609.1`
2	Cytoplasm	细胞质	0.60000	`XP_057795609.1`
3	Nucleus	细胞核	0.40000	`XP_057795609.1`
4	Chromosome	染色体	0.00000	`XP_057795609.1`
5	Centromere	着丝粒	0.00000	`XP_057795609.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:47632105`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C41
`Chr2:47632751`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A22,B127,B23
`Chr2:47632768`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr2:47632991`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A10,B118,C82,D4
`Chr2:47633002`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B136
`Chr2:47633149`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B140,C2,C32,C68
`Chr2:47633177`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B15

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057795609.1

441 aa

220

441

ACT_ACR_D1

ACT

PF26956 ACT_ACR_D1 29-103 aa PF01842 ACT 35-84 aa PF01842 ACT 128-197 aa PF01842 ACT 339-401 aa

XP_057795610.1

441 aa

220

441

ACT_ACR_D1

ACT

PF26956 ACT_ACR_D1 29-103 aa PF01842 ACT 35-84 aa PF01842 ACT 128-197 aa PF01842 ACT 339-401 aa

XP_057795611.1

441 aa

220

441

ACT_ACR_D1

ACT

PF26956 ACT_ACR_D1 29-103 aa PF01842 ACT 35-84 aa PF01842 ACT 128-197 aa PF01842 ACT 339-401 aa

XP_057795612.1

401 aa

200

401

ACT

ACT_ACR_D1

ACT

PF01842 ACT 2-44 aa PF26956 ACT_ACR_D1 2-63 aa PF01842 ACT 88-157 aa PF01842 ACT 299-361 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057795609.1`	Pfam	`PF26956`	ACT_ACR_D1	Domain	29	103	6.5e-57	190.1	ACR family N-terminal ACT domain
`XP_057795609.1`	Pfam	`PF01842`	ACT	Domain	35	84	5.4e-42	141.8	ACT domain
`XP_057795609.1`	Pfam	`PF01842`	ACT	Domain	128	197	5.4e-42	141.8	ACT domain
`XP_057795609.1`	Pfam	`PF01842`	ACT	Domain	339	401	5.4e-42	141.8	ACT domain
`XP_057795610.1`	Pfam	`PF26956`	ACT_ACR_D1	Domain	29	103	6.5e-57	190.1	ACR family N-terminal ACT domain
`XP_057795610.1`	Pfam	`PF01842`	ACT	Domain	35	84	5.4e-42	141.8	ACT domain
`XP_057795610.1`	Pfam	`PF01842`	ACT	Domain	128	197	5.4e-42	141.8	ACT domain
`XP_057795610.1`	Pfam	`PF01842`	ACT	Domain	339	401	5.4e-42	141.8	ACT domain
`XP_057795611.1`	Pfam	`PF26956`	ACT_ACR_D1	Domain	29	103	6.5e-57	190.1	ACR family N-terminal ACT domain
`XP_057795611.1`	Pfam	`PF01842`	ACT	Domain	35	84	5.4e-42	141.8	ACT domain
`XP_057795611.1`	Pfam	`PF01842`	ACT	Domain	128	197	5.4e-42	141.8	ACT domain
`XP_057795611.1`	Pfam	`PF01842`	ACT	Domain	339	401	5.4e-42	141.8	ACT domain
`XP_057795612.1`	Pfam	`PF01842`	ACT	Domain	2	44	4.4e-41	138.9	ACT domain
`XP_057795612.1`	Pfam	`PF26956`	ACT_ACR_D1	Domain	2	63	9.1e-50	167.2	ACR family N-terminal ACT domain
`XP_057795612.1`	Pfam	`PF01842`	ACT	Domain	88	157	4.4e-41	138.9	ACT domain
`XP_057795612.1`	Pfam	`PF01842`	ACT	Domain	299	361	4.4e-41	138.9	ACT domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057939628.1
AATCTTTATAGACGTAGAATGAGGACTCTATTCCTGTGCATAGTGTTGAGTGACCCCGACTCTTAAGATGTATCAAGGATTATCATCATTAATTCAATTTTGGATTAATGTCGAGAGTTGTTTATTTTTTTAATGAGAGTTTGTATAAATCAACATCAGCCAGATCGGCAGATAGATATGTATGAGTAGGAGAGAGAGAGAGAGAAGTGGAACCAAACATTCAGAAGTGATGGGGCCCGCCCGTAATTAAAAGAGAAGCG...

XM_057939626.1
CGCGCTCTTTCTCTCTCTAGCCTCCACCACCAACTGCATTCGCCCATGCATCCACGGCCCAATCTCTTCTTCTCCACCTCCTCCTTTTTCACCAACATCACAGATTCCTTCTCTCTCTAACCCACTATCCTAGAGAGAGACTGAGTTGTGAATAATAGTGGAGGCTAGTGCTCTTCCAACGTCGAAAGTTTCATTCTTGTTTCTTTTACTCCAATTTGCACACGCACAGGTCATGTATATGTGAAGCCAACTGTCAACTG...

CDS

4 records

下载 CDS FASTA

LOC131011789
ATGGGTTCGTGGGCGTACTTCGATCCTGAGTACGAGACACTAAGCATCAGAATAAATCCTCCACAGGTGTCTGTGGACAACTCTAGCTGCAGGGAATGCACTCTGGTCAAGGTTGACAGCATGAACAAACCAGGGATACTGCTGGAGGTGGTGCAAATCCTCACGGACCTTGACCTTACAATTACAAAAGCTTACATTTCCTCTGATGGCGGGTGGTTTATGGATGTGTTTCACGTCACTGATCAACATGGGCAGAAGAT...

Protein

4 records

下载 Protein FASTA

XP_057795609.1
MGSWAYFDPEYETLSIRINPPQVSVDNSSCRECTLVKVDSMNKPGILLEVVQILTDLDLTITKAYISSDGGWFMDVFHVTDQHGQKISDSKTIEYIEKALGPKGNMSGLLKPSPGKRVGLGSMGDCTAIELIGPDRPGLLSEISAVLANLQINVAAAEVWTHNRRIACVLYVNDNITNRAVDDASRLAAMEEQLKNILRGCGTDDSVAYTSFSVGSTHIDRRLHQLFFADRDYEVTGTEPDYPVKPNVTIERCEEKDYSV...

XP_057795610.1
MGSWAYFDPEYETLSIRINPPQVSVDNSSCRECTLVKVDSMNKPGILLEVVQILTDLDLTITKAYISSDGGWFMDVFHVTDQHGQKISDSKTIEYIEKALGPKGNMSGLLKPSPGKRVGLGSMGDCTAIELIGPDRPGLLSEISAVLANLQINVAAAEVWTHNRRIACVLYVNDNITNRAVDDASRLAAMEEQLKNILRGCGTDDSVAYTSFSVGSTHIDRRLHQLFFADRDYEVTGTEPDYPVKPNVTIERCEEKDYSV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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