Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002938`

染色体: Chr02 坐标: 49884668-49889793 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002938`
名称	SmilChr02G002938
描述	serine/threonine-protein kinase MPS1
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	49884668 - 49889793 / `-`

ID 对照

NCBI Gene ID	`LOC131011956`
GeneID	`131011956`
locus_tag	`-`
NCBI Name	`LOC131011956`
原始查询	`LOC131011956`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	serine/threonine-protein kinase MPS1
产物	serine/threonine-protein kinase MPS1
Arabidopsis	`AT1G77720` (PPK1) putative protein kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:844108] identity=45.7; qcov=0.923; evalue=1.45e-153; confidence=high
Rice	`Os03g0704400` - identity=79.6; qcov=0.313; evalue=2.37e-116; confidence=low
GO	GO:0000776 (kinetochore); GO:0004674 (protein serine/threonine kinase activity); GO:0004712 (protein serine/threonine/tyrosine kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005819 (spindle); GO:0007059 (chromosome segregation); GO:0007094 (mitotic spindle assembly checkpoint signaling); GO:0018105 (peptidyl-serine phosphorylation); GO:0033316 (meiotic spindle assembly checkpoint signaling); GO:0034501 (protein localization to kinetochore)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:131011956

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057795837.1`
2	Nucleoplasm	核质	1.00000	`XP_057795837.1`
3	Cytosol	细胞质基质	1.00000	`XP_057795837.1`
4	Cytoplasm	细胞质	0.80000	`XP_057795837.1`
5	Nuclear body	核内小体	0.60000	`XP_057795837.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:49884927`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B74
`Chr2:49885040`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C32,C68,D10
`Chr2:49885199`	`TGG`	`T`	2bp_deletion	frameshift_variant	1	B138
`Chr2:49885199`	`TGG`	`T`	2bp_deletion	CDS_variant	1	B138
`Chr2:49887639`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B27,C25
`Chr2:49887737`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B107
`Chr2:49887787`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C10,C18,C42
`Chr2:49887803`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr2:49888169`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B127,C5
`Chr2:49888591`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B77
`Chr2:49889516`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D4
`Chr2:49889606`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B14,B44

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057795837.1

835 aa

418

835

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 481-774 aa PF07714 PK_Tyr_Ser-Thr 487-770 aa

XP_057795838.1

812 aa

406

812

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 458-751 aa PF07714 PK_Tyr_Ser-Thr 464-747 aa

XP_057795839.1

674 aa

337

674

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 481-661 aa PF07714 PK_Tyr_Ser-Thr 487-668 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057795837.1`	Pfam	`PF00069`	Pkinase	Domain	481	774	1.4e-53	182.7	Protein kinase domain
`XP_057795837.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	487	770	2.8e-20	73.4	Protein tyrosine and serine/threonine kinase
`XP_057795838.1`	Pfam	`PF00069`	Pkinase	Domain	458	751	1.3e-53	182.8	Protein kinase domain
`XP_057795838.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	464	747	2.6e-20	73.5	Protein tyrosine and serine/threonine kinase
`XP_057795839.1`	Pfam	`PF00069`	Pkinase	Domain	481	661	7.9e-31	108.1	Protein kinase domain
`XP_057795839.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	487	668	1.1e-09	38.8	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057939855.1
CGCCTTTGCGAAATTTCAAAATCATCTCCCTCTCTCTCTCTCTCACACACACACACACACGCTCACACACAGTGCAGAGTGCTGTAATGGATGCATCTCCGTGAATGTGGTCTTCTCAGCAAATATTCGTCGAGAATCAGAAATGCTTGAGCGATTGATCGATGGAAGGGGAGCCTGACCTTCCGGCCCCACCTGCCGAGGCGAAGTTCTTCAACCCCAAGCAGAGCCGTCCGATTACCATCAACCCTGACTCGATTAAT...

XM_057939854.1
CCTTTGCGAAATTTCAAAATCATCTCCCTCTCTCTCTCTCTCACACACACACACACACGCTCACACACAGTGCAGAGTGCTGTAATGGATGCATCTCCGTGAATGTGGTCTTCTCAGCAAATATTCGTCGAGAATCAGAAATGCTTGAGCGATTGATCGATGGAAGGGGAGCCTGACCTTCCGGCCCCACCTGCCGAGGCGAAGTTCTTCAACCCCAAGCAGAGCCGTCCGATTACCATCAACCCTGACTCGATTAATCT...

CDS

3 records

下载 CDS FASTA

LOC131011956
ATGGAAGGGGAGCCTGACCTTCCGGCCCCACCTGCCGAGGCGAAGTTCTTCAACCCCAAGCAGAGCCGTCCGATTACCATCAACCCTGACTCGATTAATCTCAGTCGTTCCTTCAACACCAGCTCCACCTACAACTCGACGTCGTCCTCATCGCAGTCCCCTCCCGACTTCGTTCGCGATATTCAAGCCGCCTTCAAACGGCACCGTCCCGTAGCTGTAATGCATAGACCGAGAAGAAATGTGGTTCCTCAACGAGAGCC...

Protein

3 records

下载 Protein FASTA

XP_057795837.1
MEGEPDLPAPPAEAKFFNPKQSRPITINPDSINLSRSFNTSSTYNSTSSSSQSPPDFVRDIQAAFKRHRPVAVMHRPRRNVVPQREPPKESSIKPQSRFDSVKCKEDILQSQGLRSSVPKPKPMLYGSAYNHDNVPITPSPPSEGFTTVDPHDVNIKLFNTQRDQPTRPQINDAVASLEPGPGNALGEVQRKVHFSSDAIATSLGADDQMVTGTDNLLSHMDSIALTETETGMGNQVDTSAAVNQDWRNHNFQSMEMENS...

XP_057795838.1
MEGEPDLPAPPAEAKFFNPKQSRPITINPDSINLSRSFNTSSTYNSTSSSSQSPPDFVRDIQAAFKRHRPVAVMHRPRRNVVPQREPPKESSIKPQSRFDSVKCKEDILQSQGLRSSVPKPKPMLYGSAYNHDNVPITPSPPSEGFTTVDPHDVNIKLFNTQRDQPTRPQINDAVASLEPGPGNALGEVQRKVHFSSDAIATSLETETGMGNQVDTSAAVNQDWRNHNFQSMEMENSLRSEGGISSLLTGRTMGVHDQLH...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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