当前解析结果
SmilChr02G001993| 统一新 Gene ID | SmilChr02G001993 |
|---|---|
| 名称 | SmilChr02G001993 |
| 描述 | GDSL esterase/lipase At4g10955-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 36017547 - 36018920 / + |
| NCBI Gene ID | LOC131012202 |
|---|---|
| GeneID | 131012202 |
| locus_tag | - |
| NCBI Name | LOC131012202 |
| 原始查询 | LOC131012202 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | GDSL esterase/lipase At4g10955-like |
| 产物 | GDSL esterase/lipase At4g10955-like |
| Arabidopsis | AT5G50890 (AT5G50890)alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835161] identity=55.7; qcov=1.16; evalue=1.51e-149; confidence=high |
| Rice | Os01g0751600 (THIS1)- identity=56.7; qcov=1.12; evalue=1.7e-144; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012202 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.60000 | XP_057796092.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057796092.1 |
| 3 | Chloroplast | 叶绿体 | 0.20000 | XP_057796092.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057796092.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057796092.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:36017701 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B3 |
Chr2:36017843 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B46,D1 |
Chr2:36017966 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:36018091 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr2:36018101 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B94,C1,C59 |
Chr2:36018349 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C22 |
Chr2:36018367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
Chr2:36018488 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C28,C70 |
Chr2:36018578 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:36018607 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B16,C76 |
Chr2:36018607 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B16,C76 |
Chr2:36018647 |
T |
TAA |
2bp_insertion | frameshift_variant | 1 | B74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。