Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002025`

染色体: Chr02 坐标: 36467687-36476406 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002025`
名称	SmilChr02G002025
描述	mitochondrial outer membrane import complex protein METAXIN-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	36467687 - 36476406 / `-`

ID 对照

NCBI Gene ID	`LOC131012232`
GeneID	`131012232`
locus_tag	`-`
NCBI Name	`LOC131012232`
原始查询	`LOC131012232`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitochondrial outer membrane import complex protein METAXIN-like
产物	mitochondrial outer membrane import complex protein METAXIN-like
Arabidopsis	`AT2G19080` (AT2G19080) metaxin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:816425] identity=61; qcov=0.968; evalue=6.19e-98; confidence=high
Rice	`Os06g0168000` - identity=55.7; qcov=0.923; evalue=3.42e-79; confidence=high
GO	GO:0001401 (SAM complex); GO:0007005 (mitochondrion organization)
KEGG	-
Pfam	PF17171 (GST_C_6); PF17172 (GST_N_4)
InterPro	-
eggNOG	-
NR	GeneID:131012232

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	0.80000	`XP_057796129.1`
2	Mitochondrion outer membrane	线粒体外膜	0.60000	`XP_057796129.1`
3	Peroxisome	过氧化物酶体	0.40000	`XP_057796125.1`
4	Mitochondrion membrane	线粒体膜	0.40000	`XP_057796129.1`
5	Lipid droplet	脂滴	0.40000	`XP_057796129.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:36468044`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B129,B30,B35
`Chr2:36468058`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B126
`Chr2:36468078`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B126
`Chr2:36468983`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A14
`Chr2:36469001`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B2
`Chr2:36469016`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B65,C48
`Chr2:36469040`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B124,C87
`Chr2:36469043`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B77,B93,C30,C84
`Chr2:36469047`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A14,C43
`Chr2:36470384`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B65
`Chr2:36471021`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B38
`Chr2:36471043`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B129,B30

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796125.1

326 aa

163

326

GST_N_4

GST_C_6

PF17172 GST_N_4 27-121 aa PF17171 GST_C_6 174-233 aa

XP_057796126.1

326 aa

163

326

GST_N_4

GST_C_6

PF17172 GST_N_4 27-121 aa PF17171 GST_C_6 174-233 aa

XP_057796127.1

326 aa

163

326

GST_N_4

GST_C_6

PF17172 GST_N_4 27-121 aa PF17171 GST_C_6 174-233 aa

XP_057796128.1

326 aa

163

326

GST_N_4

GST_C_6

PF17172 GST_N_4 27-121 aa PF17171 GST_C_6 174-233 aa

XP_057796129.1

220 aa

110

220

GST_N_4

GST_C_6

PF17172 GST_N_4 27-121 aa PF17171 GST_C_6 174-212 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796125.1`	Pfam	`PF17172`	GST_N_4	Domain	27	121	2.2e-19	70.7	Glutathione S-transferase N-terminal domain
`XP_057796125.1`	Pfam	`PF17171`	GST_C_6	Domain	174	233	2.4e-17	63.1	Glutathione S-transferase, C-terminal domain
`XP_057796126.1`	Pfam	`PF17172`	GST_N_4	Domain	27	121	2.2e-19	70.7	Glutathione S-transferase N-terminal domain
`XP_057796126.1`	Pfam	`PF17171`	GST_C_6	Domain	174	233	2.4e-17	63.1	Glutathione S-transferase, C-terminal domain
`XP_057796127.1`	Pfam	`PF17172`	GST_N_4	Domain	27	121	2.2e-19	70.7	Glutathione S-transferase N-terminal domain
`XP_057796127.1`	Pfam	`PF17171`	GST_C_6	Domain	174	233	2.4e-17	63.1	Glutathione S-transferase, C-terminal domain
`XP_057796128.1`	Pfam	`PF17172`	GST_N_4	Domain	27	121	2.2e-19	70.7	Glutathione S-transferase N-terminal domain
`XP_057796128.1`	Pfam	`PF17171`	GST_C_6	Domain	174	233	2.4e-17	63.1	Glutathione S-transferase, C-terminal domain
`XP_057796129.1`	Pfam	`PF17172`	GST_N_4	Domain	27	121	1.1e-19	71.6	Glutathione S-transferase N-terminal domain
`XP_057796129.1`	Pfam	`PF17171`	GST_C_6	Domain	174	212	4.9e-11	42.9	Glutathione S-transferase, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057940142.1
CATATTCATACTATTATAAAAGCCCAACTATAATAACAATACAATAAATAGTCATCTATCATTTGATTTTAGGGTTTAGATGCTAGACGCCCTAGAATCTTCTCAAGTCACCTAATTCCCCTGCTCCCTGGTTCCCCTTCTCCCTCGTCTCATCTTCAATTCCAGGCGCCTGGAGATACAACAGCAGATTGAAGAAAAATTACCTTCTCCATCGCTATATCTTCCCCTTCTCCTTAAATCTGTAGATCTTCTCAAATCAC...

XM_057940143.1
CATATTCATACTATTATAAAAGCCCAACTATAATAACAATACAATAAATAGTCATCTATCATTTGATTTTAGGGTTTAGATGCTAGACGCCCTAGAATCTTCTCAAGTCACCTAATTCCCCTGCTCCCTGGTTCCCCTTCTCCCTCGTCTCATCTTCAATTCCAGGCGCCTGGAGATACAACAGCAGATTGAAGAAAAATTACCTTCTCCATCGCTATATCTTCCCCTTCTCCTTAAATCTGTAGATCTTCTCAAATCAC...

CDS

5 records

下载 CDS FASTA

LOC131012232
ATGGAAGATGGGAGAGGCCAAAGAGAGGCGCTGACACTTGTGGCAAGAAAGCCCAGTTTCTCGCTGCCCACCGCTTGCCCCAACTGTCTGCCTGCTTACATTTATCTTAAATTTGCCAACATCCCTTTCACTTTGGAATTCAATCTCATCCATCCTGATTCTGATCAAATACCCTTTGTTGAGTCTGGTGATTATGTTGCTTATAACAATGAGAACGGTGGGGTCCTTCAGAAATTAAAGGAAGATGACATTGTTGACTT...

Protein

5 records

下载 Protein FASTA

XP_057796125.1
MEDGRGQREALTLVARKPSFSLPTACPNCLPAYIYLKFANIPFTLEFNLIHPDSDQIPFVESGDYVAYNNENGGVLQKLKEDDIVDLDAEVSGIPEWVSFKAMVESWLADAVLYELWVGSDGKSAHKIYYSDLPWPIGNILYYKQVYAVKQLLGITSENAERREEEIYRRATVAYSALSARLGEQTFFFEDRPTSLDAVFLGHALFTLFALPETSVLRSKLLGHANLVKYAENLKLEYIDASSSSSSVPQSDPSSSASKR...

XP_057796126.1
MEDGRGQREALTLVARKPSFSLPTACPNCLPAYIYLKFANIPFTLEFNLIHPDSDQIPFVESGDYVAYNNENGGVLQKLKEDDIVDLDAEVSGIPEWVSFKAMVESWLADAVLYELWVGSDGKSAHKIYYSDLPWPIGNILYYKQVYAVKQLLGITSENAERREEEIYRRATVAYSALSARLGEQTFFFEDRPTSLDAVFLGHALFTLFALPETSVLRSKLLGHANLVKYAENLKLEYIDASSSSSSVPQSDPSSSASKR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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