Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002181`

染色体: Chr02 坐标: 39017312-39021829 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002181`
名称	SmilChr02G002181
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	39017312 - 39021829 / `-`

ID 对照

NCBI Gene ID	`LOC131012364`
GeneID	`131012364`
locus_tag	`-`
NCBI Name	`LOC131012364`
原始查询	`LOC131012364`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
产物	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
Arabidopsis	`AT1G11330` (AT1G11330) S-locus lectin protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837675] identity=50.3; qcov=1; evalue=0; confidence=high
Rice	`Os07g0551300` (OSJNBb0041B22.109) - identity=42.4; qcov=1.02; evalue=0; confidence=medium
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0048544 (recognition of pollen)
KEGG	-
Pfam	PF00069 (Pkinase); PF00954 (S_locus_glycop); PF01453 (B_lectin); PF07714 (PK_Tyr_Ser-Thr); PF08276 (PAN_2); PF11883 (DUF3403)
InterPro	-
eggNOG	-
NR	GeneID:131012364

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057796272.1`
2	Nucleus	细胞核	0.00000	`XP_057796272.1`
3	Chromosome	染色体	0.00000	`XP_057796272.1`
4	Centromere	着丝粒	0.00000	`XP_057796272.1`
5	Chromatin	染色质	0.00000	`XP_057796272.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:39018704`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C53
`Chr2:39018756`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B32,B72,C74
`Chr2:39018803`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B50,C86
`Chr2:39018980`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B65,B98
`Chr2:39019168`	`AG`	`A`	1bp_deletion	frameshift_variant	1	B58
`Chr2:39019168`	`AG`	`A`	1bp_deletion	CDS_variant	1	B58
`Chr2:39019172`	`C`	`CA`	1bp_insertion	frameshift_variant	1	D10
`Chr2:39019172`	`C`	`CA`	1bp_insertion	CDS_variant	1	D10
`Chr2:39019173`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B115,B13,B59,C8,D10
`Chr2:39019477`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B13,B59,C8
`Chr2:39019781`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A3,B20
`Chr2:39019814`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B107,B131,B54

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796272.1

826 aa

413

826

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 79-179 aa PF00954 S_locus_glycop 212-320 aa PF08276 PAN_2 350-405 aa PF00069 Pkinase 506-705 aa PF07714 PK_Tyr_Ser-Thr 506-720 aa PF11883 DUF3403 776-818 aa

XP_057796273.1

820 aa

410

820

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 79-179 aa PF00954 S_locus_glycop 212-320 aa PF08276 PAN_2 350-405 aa PF00069 Pkinase 506-705 aa PF07714 PK_Tyr_Ser-Thr 506-720 aa PF11883 DUF3403 776-820 aa

XP_057796275.1

820 aa

410

820

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 79-179 aa PF00954 S_locus_glycop 212-320 aa PF08276 PAN_2 350-405 aa PF00069 Pkinase 506-705 aa PF07714 PK_Tyr_Ser-Thr 506-720 aa PF11883 DUF3403 776-820 aa

XP_057796276.1

820 aa

410

820

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 79-179 aa PF00954 S_locus_glycop 212-320 aa PF08276 PAN_2 350-405 aa PF00069 Pkinase 506-705 aa PF07714 PK_Tyr_Ser-Thr 506-720 aa PF11883 DUF3403 776-820 aa

XP_057796277.1

820 aa

410

820

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 79-179 aa PF00954 S_locus_glycop 212-320 aa PF08276 PAN_2 350-405 aa PF00069 Pkinase 506-705 aa PF07714 PK_Tyr_Ser-Thr 506-720 aa PF11883 DUF3403 776-820 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796272.1`	Pfam	`PF01453`	B_lectin	Repeat	79	179	9.5e-35	119.9	D-mannose binding lectin
`XP_057796272.1`	Pfam	`PF00954`	S_locus_glycop	Domain	212	320	4.9e-29	101.8	S-locus glycoprotein domain
`XP_057796272.1`	Pfam	`PF08276`	PAN_2	Domain	350	405	1.8e-12	47.9	PAN-like domain
`XP_057796272.1`	Pfam	`PF00069`	Pkinase	Domain	506	705	2.7e-45	155.5	Protein kinase domain
`XP_057796272.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	506	720	1.3e-48	166.2	Protein tyrosine and serine/threonine kinase
`XP_057796272.1`	Pfam	`PF11883`	DUF3403	Family	776	818	3.8e-10	40.4	Domain of unknown function (DUF3403)
`XP_057796273.1`	Pfam	`PF01453`	B_lectin	Repeat	79	179	9.4e-35	120.0	D-mannose binding lectin
`XP_057796273.1`	Pfam	`PF00954`	S_locus_glycop	Domain	212	320	4.8e-29	101.8	S-locus glycoprotein domain
`XP_057796273.1`	Pfam	`PF08276`	PAN_2	Domain	350	405	1.8e-12	47.9	PAN-like domain
`XP_057796273.1`	Pfam	`PF00069`	Pkinase	Domain	506	705	2.7e-45	155.6	Protein kinase domain
`XP_057796273.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	506	720	1.3e-48	166.3	Protein tyrosine and serine/threonine kinase
`XP_057796273.1`	Pfam	`PF11883`	DUF3403	Family	776	820	3.9e-11	43.6	Domain of unknown function (DUF3403)
`XP_057796275.1`	Pfam	`PF01453`	B_lectin	Repeat	79	179	9.4e-35	120.0	D-mannose binding lectin
`XP_057796275.1`	Pfam	`PF00954`	S_locus_glycop	Domain	212	320	4.8e-29	101.8	S-locus glycoprotein domain
`XP_057796275.1`	Pfam	`PF08276`	PAN_2	Domain	350	405	1.8e-12	47.9	PAN-like domain
`XP_057796275.1`	Pfam	`PF00069`	Pkinase	Domain	506	705	2.7e-45	155.6	Protein kinase domain
`XP_057796275.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	506	720	1.3e-48	166.3	Protein tyrosine and serine/threonine kinase
`XP_057796275.1`	Pfam	`PF11883`	DUF3403	Family	776	820	3.9e-11	43.6	Domain of unknown function (DUF3403)
`XP_057796276.1`	Pfam	`PF01453`	B_lectin	Repeat	79	179	9.4e-35	120.0	D-mannose binding lectin
`XP_057796276.1`	Pfam	`PF00954`	S_locus_glycop	Domain	212	320	4.8e-29	101.8	S-locus glycoprotein domain
`XP_057796276.1`	Pfam	`PF08276`	PAN_2	Domain	350	405	1.8e-12	47.9	PAN-like domain
`XP_057796276.1`	Pfam	`PF00069`	Pkinase	Domain	506	705	2.7e-45	155.6	Protein kinase domain
`XP_057796276.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	506	720	1.3e-48	166.3	Protein tyrosine and serine/threonine kinase
`XP_057796276.1`	Pfam	`PF11883`	DUF3403	Family	776	820	3.9e-11	43.6	Domain of unknown function (DUF3403)
`XP_057796277.1`	Pfam	`PF01453`	B_lectin	Repeat	79	179	9.4e-35	120.0	D-mannose binding lectin
`XP_057796277.1`	Pfam	`PF00954`	S_locus_glycop	Domain	212	320	4.8e-29	101.8	S-locus glycoprotein domain
`XP_057796277.1`	Pfam	`PF08276`	PAN_2	Domain	350	405	1.8e-12	47.9	PAN-like domain
`XP_057796277.1`	Pfam	`PF00069`	Pkinase	Domain	506	705	2.7e-45	155.6	Protein kinase domain
`XP_057796277.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	506	720	1.3e-48	166.3	Protein tyrosine and serine/threonine kinase
`XP_057796277.1`	Pfam	`PF11883`	DUF3403	Family	776	820	3.9e-11	43.6	Domain of unknown function (DUF3403)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057940292.1
AACAAAGAAAATTCAAATATTGACTATGAATAGATCAAACGTTTCTAAATTTCTGAATCATTCTAAATTCAGAGTAGTGTCATCCTAGTCCTAGCAAAGAAGAAGAAAAGTAATTCATGGGTTTCAACCTCCAGAAAAGATTGCGATATTATGTGCTTCAACTCCTTTTCCTCATATTTTATTGTTTCCTTACATTTTCTTCAGCTATCGACCTCATAAAGGCTAATGAATCTCTTAGAAACTCTGACGCTTTGATTTCC...

XM_057940293.1
AACAAAGAAAATTCAAATATTGACTATGAATAGATCAAACGTTTCTAAATTTCTGAATCATTCTAAATTCAGAGTAGTGTCATCCTAGTCCTAGCAAAGAAGAAGAAAAGTAATTCATGGGTTTCAACCTCCAGAAAAGATTGCGATATTATGTGCTTCAACTCCTTTTCCTCATATTTTATTGTTTCCTTACATTTTCTTCAGCTATCGACCTCATAAAGGCTAATGAATCTCTTAGAAACTCTGACGCTTTGATTTCC...

CDS

5 records

下载 CDS FASTA

LOC131012364
ATGGGTTTCAACCTCCAGAAAAGATTGCGATATTATGTGCTTCAACTCCTTTTCCTCATATTTTATTGTTTCCTTACATTTTCTTCAGCTATCGACCTCATAAAGGCTAATGAATCTCTTAGAAACTCTGACGCTTTGATTTCCAAAGGAAATACATTCAAACTGAGTTTTTTCAGCCCACCAAATAGCAGCCGACGTTATGTTGGTATCATGTACAATCTCCCGGTGATGAGTGTTGTATGGGTAGCTAATAGAGATAA...

Protein

5 records

下载 Protein FASTA

XP_057796272.1
MGFNLQKRLRYYVLQLLFLIFYCFLTFSSAIDLIKANESLRNSDALISKGNTFKLSFFSPPNSSRRYVGIMYNLPVMSVVWVANRDKPLNDSSGTFQISSDGNLVILDGRKEIVWSTNLSSSVANYSAVLLDTGNLVLQDDSNNEYVWESFQHASDSFLPKMRLFVDANRKEKNILTSWTSPDDPAPGRFTMIIEPDIPQSYVLEDGTKPCFRSGPWNGQRFIGLPGMRSLYNDGTNVGSDSPGTAFYVFTVPNSSVLLY...

XP_057796273.1
MGFNLQKRLRYYVLQLLFLIFYCFLTFSSAIDLIKANESLRNSDALISKGNTFKLSFFSPPNSSRRYVGIMYNLPVMSVVWVANRDKPLNDSSGTFQISSDGNLVILDGRKEIVWSTNLSSSVANYSAVLLDTGNLVLQDDSNNEYVWESFQHASDSFLPKMRLFVDANRKEKNILTSWTSPDDPAPGRFTMIIEPDIPQSYVLEDGTKPCFRSGPWNGQRFIGLPGMRSLYNDGTNVGSDSPGTAFYVFTVPNSSVLLY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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