Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002191`

染色体: Chr02 坐标: 39136070-39139844 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002191`
名称	SmilChr02G002191
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	39136070 - 39139844 / `-`

ID 对照

NCBI Gene ID	`LOC131012372`
GeneID	`131012372`
locus_tag	`-`
NCBI Name	`LOC131012372`
原始查询	`LOC131012372`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
产物	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
Arabidopsis	`AT1G11330` (AT1G11330) S-locus lectin protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837675] identity=47.5; qcov=0.93; evalue=0; confidence=high
Rice	`Os07g0551300` (OSJNBb0041B22.109) - identity=41.2; qcov=0.952; evalue=2.11e-157; confidence=medium
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0048544 (recognition of pollen)
KEGG	-
Pfam	PF00069 (Pkinase); PF00954 (S_locus_glycop); PF01453 (B_lectin); PF07714 (PK_Tyr_Ser-Thr); PF08276 (PAN_2)
InterPro	-
eggNOG	-
NR	GeneID:131012372

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057796283.1`
2	Nucleus	细胞核	0.00000	`XP_057796283.1`
3	Chromosome	染色体	0.00000	`XP_057796283.1`
4	Centromere	着丝粒	0.00000	`XP_057796283.1`
5	Chromatin	染色质	0.00000	`XP_057796283.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:39136447`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr2:39137035`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C58
`Chr2:39137080`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A2,B104
`Chr2:39137629`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A18
`Chr2:39137714`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B107,B140,D7
`Chr2:39137736`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr2:39138745`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D8
`Chr2:39138763`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C86
`Chr2:39138787`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B3,B93,C15
`Chr2:39138842`	`ACT`	`A`	2bp_deletion	frameshift_variant	5	A18,A2,B122,C16,C61
`Chr2:39138842`	`ACT`	`A`	2bp_deletion	CDS_variant	5	A18,A2,B122,C16,C61
`Chr2:39139025`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C60

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796283.1

835 aa

418

835

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

PF01453 B_lectin 87-189 aa PF00954 S_locus_glycop 221-329 aa PF08276 PAN_2 361-419 aa PF00069 Pkinase 527-725 aa PF07714 PK_Tyr_Ser-Thr 528-793 aa

XP_057796284.1

713 aa

356

713

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

PF01453 B_lectin 87-189 aa PF00954 S_locus_glycop 221-329 aa PF08276 PAN_2 361-419 aa PF00069 Pkinase 527-682 aa PF07714 PK_Tyr_Ser-Thr 528-679 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796283.1`	Pfam	`PF01453`	B_lectin	Repeat	87	189	2.6e-28	99.3	D-mannose binding lectin
`XP_057796283.1`	Pfam	`PF00954`	S_locus_glycop	Domain	221	329	3.5e-26	92.6	S-locus glycoprotein domain
`XP_057796283.1`	Pfam	`PF08276`	PAN_2	Domain	361	419	5.8e-16	59.1	PAN-like domain
`XP_057796283.1`	Pfam	`PF00069`	Pkinase	Domain	527	725	5.2e-43	148.1	Protein kinase domain
`XP_057796283.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	528	793	3.8e-46	158.2	Protein tyrosine and serine/threonine kinase
`XP_057796284.1`	Pfam	`PF01453`	B_lectin	Repeat	87	189	2.2e-28	99.5	D-mannose binding lectin
`XP_057796284.1`	Pfam	`PF00954`	S_locus_glycop	Domain	221	329	2.7e-26	93.0	S-locus glycoprotein domain
`XP_057796284.1`	Pfam	`PF08276`	PAN_2	Domain	361	419	4.2e-16	59.5	PAN-like domain
`XP_057796284.1`	Pfam	`PF00069`	Pkinase	Domain	527	682	6.4e-31	108.4	Protein kinase domain
`XP_057796284.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	528	679	8.7e-32	111.1	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057940300.1
GAGAAAGAAAAGAAAAAGTGAAGTCATCATGGATTGACAAATCGAGATAGCAACTTGCACTTGCCAGCGCCCTCGCATCGCATATGTATGGCTGCTAAAAAACATTTACTACAATTATAGATTTGGTAAGAAAAAGTTTTAAGAATCAGATAAGAATAACGTGTTTGAGATGGCGAATCGCGACCTCAGTCTGAAATGGATTAAGTCTTGAATGAATTCAAACAGTTTTGTTCACACGATGATGTTCCAAACCACAAAAT...

XM_057940301.1
AGAAAAGAAAAAGTGAAGTCATCATGGATTGACAAATCGAGATAGCAACTTGCACTTGCCAGCGCCCTCGCATCGCATATGTATGGCTGCTAAAAAACATTTACTACAATTATAGATTTGGTAAGAAAAAGTTTTAAGAATCAGATAAGAATAACGTGTTTGAGATGGCGAATCGCGACCTCAGTCTGAAATGGATTAAGTCTTGAATGAATTCAAACAGTTTTGTTCACACGATGATGTTCCAAACCACAAAATTCCTG...

CDS

2 records

下载 CDS FASTA

LOC131012372
ATGAATTCAAACAGTTTTGTTCACACGATGATGTTCCAAACCACAAAATTCCTGCAACTTGTTGTCCAATTCTCGATCATCACACTGCTGCGCGACGCCTCCTGTCTGGAAACAGACACCGTCGACGCATCTCTAATCCTCAAAGACTCCGACACCATCCACTCCGCCGGCAGGCAGTTCACCCTCGGCTTCTTCACCCCCAACGCCACCACCCGCCGCCGCTACCTCGGCATCTGGTACTACGTCTCCCCCGCCTCCAT...

Protein

2 records

下载 Protein FASTA

XP_057796283.1
MNSNSFVHTMMFQTTKFLQLVVQFSIITLLRDASCLETDTVDASLILKDSDTIHSAGRQFTLGFFTPNATTRRRYLGIWYYVSPASITWVANRDTPLTDSRGSLSISPAGDLHLTSGDGSLVWSSSSPPSPPRNATAQLLDSGNLVLRDAGSGITLWESHQTPMDSFLPTMRVTHNPRTGKRVDLNSWRAPHDPGRGNFTAGLYAVGIPQVYIWKDGVRVWRSGPWNGRILTGVTGMYSVYVDGFSLGMEEDGTYYFTRN...

XP_057796284.1
MNSNSFVHTMMFQTTKFLQLVVQFSIITLLRDASCLETDTVDASLILKDSDTIHSAGRQFTLGFFTPNATTRRRYLGIWYYVSPASITWVANRDTPLTDSRGSLSISPAGDLHLTSGDGSLVWSSSSPPSPPRNATAQLLDSGNLVLRDAGSGITLWESHQTPMDSFLPTMRVTHNPRTGKRVDLNSWRAPHDPGRGNFTAGLYAVGIPQVYIWKDGVRVWRSGPWNGRILTGVTGMYSVYVDGFSLGMEEDGTYYFTRN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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