当前解析结果
SmilChr01G005346| 统一新 Gene ID | SmilChr01G005346 |
|---|---|
| 名称 | SmilChr01G005346 |
| 描述 | uncharacterized SmilChr01G005346 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 70702058 - 70714857 / + |
| NCBI Gene ID | LOC131012512 |
|---|---|
| GeneID | 131012512 |
| locus_tag | - |
| NCBI Name | LOC131012512 |
| 原始查询 | LOC131012512 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | subtilisin-like serine protease 2 [Source:NCBI gene (formerly Entrezgene);Acc:829650]; symbol=SLP2; hit=AT4G34980; species=arabidopsis; confidence=weak |
| 产物 | subtilisin-like serine protease 2 [Source:NCBI gene (formerly Entrezgene);Acc:829650]; symbol=SLP2; hit=AT4G34980; species=arabidopsis; confidence=weak |
| Arabidopsis | AT4G34980 (SLP2)subtilisin-like serine protease 2 [Source:NCBI gene (formerly Entrezgene);Acc:829650] identity=63.8; qcov=0.209; evalue=2.9e-36; confidence=weak |
| Rice | Os03g0242900 (OsSub28)- identity=58.1; qcov=0.209; evalue=1.91e-34; confidence=weak |
| GO | GO:0004252 (serine-type endopeptidase activity); GO:0006508 (proteolysis) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012512 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057796495.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057796495.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057796495.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057796495.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057796495.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:70702203 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr1:70702220 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr1:70702238 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr1:70702285 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A16,B3,B71,C83 |
Chr1:70702290 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B78 |
Chr1:70702306 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B33,C75 |
Chr1:70702309 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr1:70703154 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B120,B60,B96 |
Chr1:70703172 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr1:70703192 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,C15 |
Chr1:70703278 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,B33,D1 |
Chr1:70704950 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。