Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G000217`

染色体: Chr02 坐标: 2827451-2832527 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G000217`
名称	SmilChr02G000217
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	2827451 - 2832527 / `-`

ID 对照

NCBI Gene ID	`LOC131012621`
GeneID	`131012621`
locus_tag	`-`
NCBI Name	`LOC131012621`
原始查询	`LOC131012621`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230
产物	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230
Arabidopsis	`AT4G03230` (AT4G03230) G-type lectin S-receptor-like Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:828018] identity=49.2; qcov=1.01; evalue=0; confidence=high
Rice	`Os03g0556600` - identity=40.6; qcov=1.03; evalue=0; confidence=medium
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0048544 (recognition of pollen)
KEGG	-
Pfam	PF00069 (Pkinase); PF00954 (S_locus_glycop); PF01453 (B_lectin); PF07714 (PK_Tyr_Ser-Thr); PF08276 (PAN_2); PF11883 (DUF3403)
InterPro	-
eggNOG	-
NR	GeneID:131012621

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057796589.1`
2	Nucleus	细胞核	0.00000	`XP_057796589.1`
3	Chromosome	染色体	0.00000	`XP_057796589.1`
4	Centromere	着丝粒	0.00000	`XP_057796589.1`
5	Chromatin	染色质	0.00000	`XP_057796589.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:2827677`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr2:2827688`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B130,C55
`Chr2:2827779`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B45
`Chr2:2827860`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B107,B21,C47,C49,C71
`Chr2:2828078`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A2,B122,C30,C82,D9
`Chr2:2828100`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:2828103`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B53,C18
`Chr2:2828703`	`G`	`A`	EMS_canonical_SNV	stop_gained	2	B14,C4
`Chr2:2828703`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B14,C4
`Chr2:2829050`	`GC`	`G`	1bp_deletion	frameshift_variant	36	A11,A15,A20,A4,B1,B105,B108,B115,B119,B12,B123,B136,B140,B33,B35,B42,B43,B56,B68,B76,B78,B96,C10,C2,C23,C28,C38,C40,C41,C44,C50,C57,C77,C81,C85,D7
`Chr2:2829524`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr2:2829878`	`A`	`ACG`	2bp_insertion	frameshift_variant	146	A13,A14,A15,A18,A2,A20,A21,A22,A23,A4,A7,A9,B1,B100,B102,B107,B108,B110,B113,B115,B117,B119,B122,B123,B125,B126,B128,B13,B130,B132,B133,B137,B138,B139,B14,B140,B16,B17,B18,B2,B21,B23,B25,B26,B28,B3,B33,B34,B35,B36,B38,B39,B4,B40,B42,B43,B44,B45,B48,B49,B50,B51,B52,B55,B56,B58,B60,B64,B67,B68,B7,B71,B72,B73,B76,B77,B78,B79,B8,B84,B85,B86,B87,B9,B90,B92,B94,B96,C1,C10,C15,C17,C18,C19,C2,C20,C21,C23,C26,C27,C28,C3,C30,C31,C33,C36,C37,C4,C40,C41,C43,C44,C45,C46,C47,C5,C51,C52,C55,C57,C6,C61,C64,C66,C7,C70,C71,C72,C73,C75,C77,C79,C8,C80,C81,C82,C84,C85,C86,C87,D1,D10,D4,D6,D7,D8

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796589.1

860 aa

430

860

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 82-172 aa PF00954 S_locus_glycop 253-331 aa PF08276 PAN_2 354-422 aa PF00069 Pkinase 541-807 aa PF07714 PK_Tyr_Ser-Thr 544-808 aa PF11883 DUF3403 813-860 aa

XP_057796590.1

856 aa

428

856

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 82-172 aa PF00954 S_locus_glycop 253-331 aa PF08276 PAN_2 354-422 aa PF00069 Pkinase 537-803 aa PF07714 PK_Tyr_Ser-Thr 540-804 aa PF11883 DUF3403 809-856 aa

XP_057796591.1

836 aa

418

836

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 58-148 aa PF00954 S_locus_glycop 229-307 aa PF08276 PAN_2 330-398 aa PF00069 Pkinase 517-783 aa PF07714 PK_Tyr_Ser-Thr 520-784 aa PF11883 DUF3403 789-836 aa

XP_057796592.1

836 aa

418

836

B_lectin

S_locus_glycop

PAN_2

Pkinase

PK_Tyr_Ser-Thr

DUF3403

PF01453 B_lectin 58-148 aa PF00954 S_locus_glycop 229-307 aa PF08276 PAN_2 330-398 aa PF00069 Pkinase 517-783 aa PF07714 PK_Tyr_Ser-Thr 520-784 aa PF11883 DUF3403 789-836 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796589.1`	Pfam	`PF01453`	B_lectin	Repeat	82	172	4.5e-21	76.0	D-mannose binding lectin
`XP_057796589.1`	Pfam	`PF00954`	S_locus_glycop	Domain	253	331	1.6e-13	51.8	S-locus glycoprotein domain
`XP_057796589.1`	Pfam	`PF08276`	PAN_2	Domain	354	422	4.2e-08	33.9	PAN-like domain
`XP_057796589.1`	Pfam	`PF00069`	Pkinase	Domain	541	807	1.6e-43	149.7	Protein kinase domain
`XP_057796589.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	544	808	2.2e-49	168.8	Protein tyrosine and serine/threonine kinase
`XP_057796589.1`	Pfam	`PF11883`	DUF3403	Family	813	860	2.4e-08	34.6	Domain of unknown function (DUF3403)
`XP_057796590.1`	Pfam	`PF01453`	B_lectin	Repeat	82	172	4.5e-21	76.0	D-mannose binding lectin
`XP_057796590.1`	Pfam	`PF00954`	S_locus_glycop	Domain	253	331	1.6e-13	51.9	S-locus glycoprotein domain
`XP_057796590.1`	Pfam	`PF08276`	PAN_2	Domain	354	422	4.2e-08	33.9	PAN-like domain
`XP_057796590.1`	Pfam	`PF00069`	Pkinase	Domain	537	803	1.6e-43	149.7	Protein kinase domain
`XP_057796590.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	540	804	2.1e-49	168.9	Protein tyrosine and serine/threonine kinase
`XP_057796590.1`	Pfam	`PF11883`	DUF3403	Family	809	856	2.4e-08	34.6	Domain of unknown function (DUF3403)
`XP_057796591.1`	Pfam	`PF01453`	B_lectin	Repeat	58	148	4.3e-21	76.1	D-mannose binding lectin
`XP_057796591.1`	Pfam	`PF00954`	S_locus_glycop	Domain	229	307	1.5e-13	51.9	S-locus glycoprotein domain
`XP_057796591.1`	Pfam	`PF08276`	PAN_2	Domain	330	398	4.2e-08	33.9	PAN-like domain
`XP_057796591.1`	Pfam	`PF00069`	Pkinase	Domain	517	783	1.5e-43	149.8	Protein kinase domain
`XP_057796591.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	520	784	2e-49	169.0	Protein tyrosine and serine/threonine kinase
`XP_057796591.1`	Pfam	`PF11883`	DUF3403	Family	789	836	2.3e-08	34.7	Domain of unknown function (DUF3403)
`XP_057796592.1`	Pfam	`PF01453`	B_lectin	Repeat	58	148	4.3e-21	76.1	D-mannose binding lectin
`XP_057796592.1`	Pfam	`PF00954`	S_locus_glycop	Domain	229	307	1.5e-13	51.9	S-locus glycoprotein domain
`XP_057796592.1`	Pfam	`PF08276`	PAN_2	Domain	330	398	4.2e-08	33.9	PAN-like domain
`XP_057796592.1`	Pfam	`PF00069`	Pkinase	Domain	517	783	1.5e-43	149.8	Protein kinase domain
`XP_057796592.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	520	784	2e-49	169.0	Protein tyrosine and serine/threonine kinase
`XP_057796592.1`	Pfam	`PF11883`	DUF3403	Family	789	836	2.3e-08	34.7	Domain of unknown function (DUF3403)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057940609.1
GTGACAATTCAAATAGAAATTGAGTTATTTAAAATGGAACAGAGGGTAATATACAATATATTTTTTTTAATATTTCCGCCGGAGTAGTAAAATACAGTGCGTGAAGTGGAATCCATCTGTTTTGGAGGCGTCCGTGTTGATGACATCGGCTGAGTTTGAAGTAATTTTTTTCAGTCAAGAGATGACTGCAGAGACAATTTATGGTGGTGATGAAAAAAAGAGATAGCATCAGCGTGGGGGAGCTATTAAAGTTGAGTACT...

XM_057940608.1
GTGACAATTCAAATAGAAATTGAGTTATTTAAAATGGAACAGAGGGTAATATACAATATATTTTTTTTAATATTTCCGCCGGAGTAGTAAAATACAGTGCGTGAAGTGGAATCCATCTGTTTTGGAGGCGTCCGTGTTGATGACATCGGCTGAGTTTGAAGTGGTAGAATTATACTTGTATATGGTGAAATCTGTGGTCAATAACAACAATTGAGACTTTTCAAAAGCGTGTGAACTAATTTTTTTCAGTCAAGAGATGA...

CDS

4 records

下载 CDS FASTA

LOC131012621
ATGGTGGTGATGAAAAAAAGAGATAGCATCAGCGTGGGGGAGCTATTAAAGTTGAGTACTGAGACTCTTGTATCAGCTGGGAGCCGATTTGAACTTGGTTTTTTCACTCCTGAAGGAAACAATGGTAGCAGATATTTAGGCATATGGTATTACAATGTGTCACAAAGAATTGTCGTGTGGGTTGCGAAAAGAGATGCGCCACTCCCCAGTTCCTGTGGAGGTATCCGAATTCGAGAGGATGATGGAAATGTTGAGGTTGA...

Protein

4 records

下载 Protein FASTA

XP_057796589.1
MGCMHFLSAFSFSFSLITLLVFSCCCKCEGRDSISVGELLKLSTETLVSAGSRFELGFFTPEGNNGSRYLGIWYYNVSQRIVVWVAKRDAPLPSSCGGIRIREDDGNVEVECSKGEVYPVTQLARSADSNRTLQLLDSGNLVLVDANSSERVWQSFSEPTDTFLPGMKLNDTVKLSSWISPSNPAEGDYSFVQEQGVYQIYERSVNVHWKSNEPGSFIKDSSFMKDALPSFVDQMLSGSATTSNERNGNGNGKRTIKYNK...

XP_057796590.1
MGCMHFLSAFSFSFSLITLLVFSCCCKCEGRDSISVGELLKLSTETLVSAGSRFELGFFTPEGNNGSRYLGIWYYNVSQRIVVWVAKRDAPLPSSCGGIRIREDDGNVEVECSKGEVYPVTQLARSADSNRTLQLLDSGNLVLVDANSSERVWQSFSEPTDTFLPGMKLNDTVKLSSWISPSNPAEGDYSFVQEQGVYQIYERSVNVHWKSNEPGSFIKDSSFMKDALPSFVDQMLSGSATTSNERNGNGNGKRTIKYNK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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