当前解析结果
SmilChr02G000382| 统一新 Gene ID | SmilChr02G000382 |
|---|---|
| 名称 | SmilChr02G000382 |
| 描述 | protein JASON-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 4780702 - 4783956 / - |
| NCBI Gene ID | LOC131012737 |
|---|---|
| GeneID | 131012737 |
| locus_tag | - |
| NCBI Name | LOC131012737 |
| 原始查询 | LOC131012737 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein JASON-like |
| 产物 | protein JASON-like |
| Arabidopsis | AT1G06660 (JASON)aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit [Source:NCBI gene (formerly Entrezgene);Acc:837176] identity=37.7; qcov=0.944; evalue=1.3e-66; confidence=medium |
| Rice | Os02g0168300- identity=34.1; qcov=0.646; evalue=5.39e-31; confidence=low |
| GO | GO:0007142 (male meiosis II) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012737 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057796718.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057796718.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057796718.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057796718.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057796718.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:4780918 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr2:4781090 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B36 |
Chr2:4781102 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A2,C42,C53 |
Chr2:4781260 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A2,C42 |
Chr2:4781463 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A3,B46,B8,B94 |
Chr2:4781756 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr2:4781862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C1,C51 |
Chr2:4781878 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B120,B7,C20,C58 |
Chr2:4782255 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B32 |
Chr2:4782255 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
Chr2:4782262 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C2,C32,C68 |
Chr2:4783355 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B1,B65,C51 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。