Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G000559`

染色体: Chr02 坐标: 7879072-7882572 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G000559`
名称	SmilChr02G000559
描述	G-type lectin S-receptor-like serine/threonine-protein kinase B120
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	7879072 - 7882572 / `-`

ID 对照

NCBI Gene ID	`LOC131012907`
GeneID	`131012907`
locus_tag	`-`
NCBI Name	`LOC131012907`
原始查询	`LOC131012907`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	G-type lectin S-receptor-like serine/threonine-protein kinase B120
产物	G-type lectin S-receptor-like serine/threonine-protein kinase B120
Arabidopsis	`AT1G67520` (AT1G67520) lectin protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:843073] identity=66.1; qcov=0.775; evalue=2.89e-86; confidence=high
Rice	`Os01g0783800` - identity=69.7; qcov=0.758; evalue=3.69e-86; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:131012907

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057796865.1`
2	Cytosol	细胞质基质	0.80000	`XP_057796867.1`
3	Cytoplasm	细胞质	0.20000	`XP_057796867.1`
4	Nucleus	细胞核	0.00000	`XP_057796865.1`
5	Chromosome	染色体	0.00000	`XP_057796865.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:7879241`	`G`	`GA`	1bp_insertion	frameshift_variant	1	B35
`Chr2:7879241`	`G`	`GA`	1bp_insertion	CDS_variant	1	B35
`Chr2:7879242`	`C`	`CT`	1bp_insertion	frameshift_variant	1	B35
`Chr2:7879242`	`C`	`CT`	1bp_insertion	CDS_variant	1	B35
`Chr2:7879261`	`CA`	`C`	1bp_deletion	frameshift_variant	3	B125,B35,C12
`Chr2:7879261`	`CA`	`C`	1bp_deletion	CDS_variant	3	B125,B35,C12
`Chr2:7879272`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B115,C83
`Chr2:7879277`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B115,C83
`Chr2:7879299`	`TTG`	`T`	2bp_deletion	frameshift_variant	5	B1,B125,B35,B50,C12
`Chr2:7879299`	`TTG`	`T`	2bp_deletion	CDS_variant	5	B1,B125,B35,B50,C12
`Chr2:7879359`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B15,C45,D11
`Chr2:7879455`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B135

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796865.1

372 aa

186

372

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 60-259 aa PF07714 PK_Tyr_Ser-Thr 60-327 aa

XP_057796867.1

244 aa

122

244

PK_Tyr_Ser-Thr

Pkinase

PF07714 PK_Tyr_Ser-Thr 60-212 aa PF00069 Pkinase 60-231 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796865.1`	Pfam	`PF00069`	Pkinase	Domain	60	259	8e-43	147.4	Protein kinase domain
`XP_057796865.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	60	327	2.2e-48	165.5	Protein tyrosine and serine/threonine kinase
`XP_057796867.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	60	212	2.4e-33	116.3	Protein tyrosine and serine/threonine kinase
`XP_057796867.1`	Pfam	`PF00069`	Pkinase	Domain	60	231	1.3e-33	117.3	Protein kinase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057940882.1
CAAAACAAAACAAAAAAAAGAATCAAAGAACTTACCGTTTTTTTTTTCAACCAAAATTTACGCTCCCACTTCTTCGTAAATTTCGCCGCTGTGGTAAGCTGCCGCGCCGGTTGAAATACAAACCGCCGTCGTCACCGCCGCAGGACATTGTTTGTAAATGGCTAAGGCAAGCCCAATCCAACATAAAATCGGAAGTTTCACTGCAAATGTGGTTCTAACATCAGTTTTCAAGAGTAACCGTACGTTGTGGTTGAAATTTC...

XM_057940884.1
ATGAATCTGTGGAATTACCGAATAATGAATGCGAGTTTCAGTGCTCAACACATTGCCCCTGCACTGCTTATGCCTACGGCAGTGGAGAAAGCTGTATATTTTTTAGTGGGGACTTTCTAGATTTGGAAAGCCCAACAAATAATTCTGCTGGGGTGGATCTTTATGTCAAAGTGAAACCAATAGGGAAGAGAAAAGTGCCTCTTTTGGAGTTAGTGTTGCCCATTACTGCTGCACTACTCTTATCTTGTTTTGGTTTCTGT...

CDS

2 records

下载 CDS FASTA

LOC131012907
ATGAAGAAAAAATCCAAGGACACACATCAAAATCTACTACTTTTTGATTTGAACTCAAATGGAGCGGAATGTCAGAAAGGCGCTGAAGTTGGTAAAAGTCATGGAGGAGAGAAAACTGACGGTTACGAGCTGCCCATTTTCAGTTTCTCTAGCATAGTCGCGTCGACTAATAACTTTTCCATGGAGAACAAGCTTGGAGAGGGTGGTTTTGGACCTGTTTACAAGGGAGAACTTCTAAATGGACTGTTTGTCGCTGTGAA...

Protein

2 records

下载 Protein FASTA

XP_057796865.1
MKKKSKDTHQNLLLFDLNSNGAECQKGAEVGKSHGGEKTDGYELPIFSFSSIVASTNNFSMENKLGEGGFGPVYKGELLNGLFVAVKRLSKRSGQGLEEFKNETEVIAKLQHRNLVGILGCCIENDEMILVYEYMPNKSLDFFIFEPTSGVMLEWAKRVQIIEGIAQGILYLHHYSRLRIVHRDLKASNILLDAEMNPKISDFGMARIFGGNDLQANTERIVGTYGYMSPEYAMEGLFSVKSDVFAFGVLMLEIISGKKN...

XP_057796867.1
MKKKSKDTHQNLLLFDLNSNGAECQKGAEVGKSHGGEKTDGYELPIFSFSSIVASTNNFSMENKLGEGGFGPVYKGELLNGLFVAVKRLSKRSGQGLEEFKNETEVIAKLQHRNLVGILGCCIENDEMILVYEYMPNKSLDFFIFEPTSGVMLEWAKRVQIIEGIAQGILYLHHYSRLRIVHRDLKASNILLDAEMNPKISDFGMARIFGGNDLQANTERIVGTYFANAVVICHQNMPWKDFSL

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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