Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G000583`

染色体: Chr02 坐标: 8384758-8393781 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G000583`
名称	SmilChr02G000583
描述	uncharacterized SmilChr02G000583
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	8384758 - 8393781 / `-`

ID 对照

NCBI Gene ID	`LOC131012924`
GeneID	`131012924`
locus_tag	`-`
NCBI Name	`LOC131012924`
原始查询	`LOC131012924`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:841460]; symbol=AT1G50380; hit=AT1G50380; species=arabidopsis; confidence=high
产物	Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:841460]; symbol=AT1G50380; hit=AT1G50380; species=arabidopsis; confidence=high
Arabidopsis	`AT1G50380` (AT1G50380) Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:841460] identity=75.6; qcov=0.908; evalue=0; confidence=high
Rice	`Os06g0730600` (OsPOP15) - identity=70.4; qcov=0.965; evalue=0; confidence=high
GO	GO:0004252 (serine-type endopeptidase activity); GO:0005829 (cytosol); GO:0006508 (proteolysis)
KEGG	-
Pfam	PF00326 (Peptidase_S9); PF02897 (Peptidase_S9_N)
InterPro	-
eggNOG	-
NR	GeneID:131012924

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057796875.1`
2	Cytoplasm	细胞质	0.80000	`XP_057796875.1`
3	Mitochondrion	线粒体	0.20000	`XP_057796876.1`
4	Chloroplast	叶绿体	0.20000	`XP_057796876.1`
5	Peroxisome	过氧化物酶体	0.20000	`XP_057796876.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:8385552`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B66,C26
`Chr2:8386277`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B138,B25,B31,C59,D8
`Chr2:8387026`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:8387166`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C50
`Chr2:8387176`	`A`	`AT`	1bp_insertion	frameshift_variant	2	A2,B96
`Chr2:8387176`	`A`	`AT`	1bp_insertion	CDS_variant	2	A2,B96
`Chr2:8387269`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B137,B2,B91,C27
`Chr2:8389645`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B2,C27
`Chr2:8389759`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A1,C2,C81,C87
`Chr2:8389804`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A1,C2,C81,C87
`Chr2:8389893`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B67
`Chr2:8389924`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B40,C78,D5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796875.1

706 aa

353

706

Peptidase_S9_N

Peptidase_S9

PF02897 Peptidase_S9_N 4-421 aa PF00326 Peptidase_S9 485-700 aa

XP_057796876.1

773 aa

386

773

Peptidase_S9_N

Peptidase_S9

PF02897 Peptidase_S9_N 71-488 aa PF00326 Peptidase_S9 552-767 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796875.1`	Pfam	`PF02897`	Peptidase_S9_N	Repeat	4	421	2.3e-102	343.6	Prolyl oligopeptidase, N-terminal beta-propeller domain
`XP_057796875.1`	Pfam	`PF00326`	Peptidase_S9	Domain	485	700	3.7e-62	210.3	Prolyl oligopeptidase family
`XP_057796876.1`	Pfam	`PF02897`	Peptidase_S9_N	Repeat	71	488	2.9e-102	343.3	Prolyl oligopeptidase, N-terminal beta-propeller domain
`XP_057796876.1`	Pfam	`PF00326`	Peptidase_S9	Domain	552	767	4.4e-62	210.1	Prolyl oligopeptidase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057940893.1
AACGAAAAGACGACGACGGCGCGAACGAGAGCGAGAAAGACGACAGCGGCGGCGGTGCAAATGAGGTATGAGCGGCCTTTATCAGCTGCCGTATCACATTTTTCATTCTCAATCTCAACAACCCAAACCAGAGCTGCAATTTCTTCGCTCACATCACTTCAACTCTACACTAACTATAAGCTTTTCAAATCCCAATCTTCTTCGTCGGCATCTCACATTCAGCGGAGAAGTTTCACGCGCGGAGTCTCGTCGTCGTCGAA...

XM_057940892.1
CGAAAAGACGACGACGGCGCGAACGAGAGCGAGAAAGACGACAGCGGCGGCGGTGCAAATGAGCGGAGAAGTTTCACGCGCGGAGTCTCGTCGTCGTCGAAAATGGAGCCTCCCAAGGCTAAGAAAGTGAAGCACGAGATGGAGATGTTCGGCGACGTCAGAGTCGACAATTACTACTGGCTTCGCGACGATTCTCGCTCCGATCCCGAAGTTTTGGTGCATCTTCGTCAGGAGAATGCTTACGTGGATCATATGATGTC...

CDS

2 records

下载 CDS FASTA

LOC131012924
ATGAGGTATGAGCGGCCTTTATCAGCTGCCGTATCACATTTTTCATTCTCAATCTCAACAACCCAAACCAGAGCTGCAATTTCTTCGCTCACATCACTTCAACTCTACACTAACTATAAGCTTTTCAAATCCCAATCTTCTTCGTCGGCATCTCACATTCAGCGGAGAAGTTTCACGCGCGGAGTCTCGTCGTCGTCGAAAATGGAGCCTCCCAAGGCTAAGAAAGTGAAGCACGAGATGGAGATGTTCGGCGACGTCAG...

LOC131012924
ATGGAGCCTCCCAAGGCTAAGAAAGTGAAGCACGAGATGGAGATGTTCGGCGACGTCAGAGTCGACAATTACTACTGGCTTCGCGACGATTCTCGCTCCGATCCCGAAGTTTTGGTGCATCTTCGTCAGGAGAATGCTTACGTGGATCATATGATGTCTGGAACCAAAAAATTAGAAGATCAGATCTATAGTGAGATAAGAAGCCGCGTGAAGGAAGATGACATATCAGAACCTTTACGCAGGGGACCTTATTATTATTA...

Protein

2 records

下载 Protein FASTA

XP_057796875.1
MEPPKAKKVKHEMEMFGDVRVDNYYWLRDDSRSDPEVLVHLRQENAYVDHMMSGTKKLEDQIYSEIRSRVKEDDISEPLRRGPYYYYKRTLEGKEYTQHCRRLVPNSNAPASVYDTMLTGPDAPPEHVILDENVKAQKHAFYIIGAFKVSPNNKLVAYAEDTKGDEIYTVYVIDAESQTPVGKPLSGVTSVLEWAGDDALVYTTRDEILRPDKVWLHKLGTEQSLDHCLYHEKDDMFSLHLASSESKKFLFVESESKITK...

XP_057796876.1
MRYERPLSAAVSHFSFSISTTQTRAAISSLTSLQLYTNYKLFKSQSSSSASHIQRRSFTRGVSSSSKMEPPKAKKVKHEMEMFGDVRVDNYYWLRDDSRSDPEVLVHLRQENAYVDHMMSGTKKLEDQIYSEIRSRVKEDDISEPLRRGPYYYYKRTLEGKEYTQHCRRLVPNSNAPASVYDTMLTGPDAPPEHVILDENVKAQKHAFYIIGAFKVSPNNKLVAYAEDTKGDEIYTVYVIDAESQTPVGKPLSGVTSVLE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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