当前解析结果
SmilChr01G005826| 统一新 Gene ID | SmilChr01G005826 |
|---|---|
| 名称 | SmilChr01G005826 |
| 描述 | receptor-like protein 20 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 74262794 - 74267868 / + |
| NCBI Gene ID | LOC131013119 |
|---|---|
| GeneID | 131013119 |
| locus_tag | - |
| NCBI Name | LOC131013119 |
| 原始查询 | LOC131013119 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | receptor-like protein 20 |
| 产物 | receptor-like protein 20 |
| Arabidopsis | AT2G25440 (RLP20)receptor like protein 20 [Source:NCBI gene (formerly Entrezgene);Acc:817082] identity=36.1; qcov=0.956; evalue=7.83e-17; confidence=low |
| Rice | Os01g0162800- identity=42.3; qcov=0.69; evalue=5.45e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131013119 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057797117.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057797117.1 |
| 3 | Vacuole | 液泡 | 0.20000 | XP_057797117.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057797117.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057797117.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:74262803 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C26 |
Chr1:74262806 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr1:74262873 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A1,B48 |
Chr1:74262894 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B126,B67,C18,C24 |
Chr1:74262895 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B102,B24,B86,C28,C38 |
Chr1:74262907 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,B1,C3 |
Chr1:74262911 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr1:74262914 |
A |
AGC |
2bp_insertion | frameshift_variant | 1 | A18 |
Chr1:74262914 |
A |
AGC |
2bp_insertion | CDS_variant | 1 | A18 |
Chr1:74262915 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | A18 |
Chr1:74262915 |
AT |
A |
1bp_deletion | CDS_variant | 1 | A18 |
Chr1:74262917 |
GGA |
G |
2bp_deletion | frameshift_variant | 4 | B117,B84,C57,C9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。