Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004378`

染色体: Chr02 坐标: 66131672-66136901 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004378`
名称	SmilChr02G004378
描述	developmentally-regulated G-protein 1
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	66131672 - 66136901 / `+`

ID 对照

NCBI Gene ID	`LOC131013124`
GeneID	`131013124`
locus_tag	`-`
NCBI Name	`LOC131013124`
原始查询	`LOC131013124`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	developmentally-regulated G-protein 1
产物	developmentally-regulated G-protein 1
Arabidopsis	`AT1G17470` (DRG1) developmentally regulated G-protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:838320] identity=90.5; qcov=0.997; evalue=0; confidence=high
Rice	`Os05g0357600` - identity=92.5; qcov=1; evalue=0; confidence=high
GO	GO:0002181 (cytoplasmic translation); GO:0003924 (GTPase activity); GO:0005525 (GTP binding); GO:0005737 (cytoplasm)
KEGG	-
Pfam	PF01926 (MMR_HSR1); PF02421 (FeoB_N); PF02824 (TGS); PF16897 (MMR_HSR1_Xtn)
InterPro	-
eggNOG	-
NR	GeneID:131013124

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057797131.1`
2	Cytosol	细胞质基质	1.00000	`XP_057797131.1`
3	Nucleus	细胞核	0.20000	`XP_057797131.1`
4	Chromosome	染色体	0.00000	`XP_057797131.1`
5	Centromere	着丝粒	0.00000	`XP_057797131.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:66133087`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B130,B137
`Chr2:66134188`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B104,B130,B137
`Chr2:66135473`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B101
`Chr2:66136518`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C84

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057797131.1

399 aa

200

399

FeoB_N

MMR_HSR1

MMR_HSR1_Xtn

TGS

PF02421 FeoB_N 64-159 aa PF01926 MMR_HSR1 64-180 aa PF16897 MMR_HSR1_Xtn 184-289 aa PF02824 TGS 290-366 aa

XP_057797132.1

399 aa

200

399

FeoB_N

MMR_HSR1

MMR_HSR1_Xtn

TGS

PF02421 FeoB_N 64-159 aa PF01926 MMR_HSR1 64-180 aa PF16897 MMR_HSR1_Xtn 184-289 aa PF02824 TGS 290-366 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057797131.1`	Pfam	`PF02421`	FeoB_N	Domain	64	159	1.6e-12	47.9	Ferrous iron transport protein B
`XP_057797131.1`	Pfam	`PF01926`	MMR_HSR1	Family	64	180	4.8e-24	85.4	50S ribosome-binding GTPase
`XP_057797131.1`	Pfam	`PF16897`	MMR_HSR1_Xtn	Family	184	289	7.5e-43	145.6	C-terminal region of MMR_HSR1 domain
`XP_057797131.1`	Pfam	`PF02824`	TGS	Domain	290	366	1.7e-18	67.1	TGS domain
`XP_057797132.1`	Pfam	`PF02421`	FeoB_N	Domain	64	159	1.6e-12	47.9	Ferrous iron transport protein B
`XP_057797132.1`	Pfam	`PF01926`	MMR_HSR1	Family	64	180	4.8e-24	85.4	50S ribosome-binding GTPase
`XP_057797132.1`	Pfam	`PF16897`	MMR_HSR1_Xtn	Family	184	289	7.5e-43	145.6	C-terminal region of MMR_HSR1 domain
`XP_057797132.1`	Pfam	`PF02824`	TGS	Domain	290	366	1.7e-18	67.1	TGS domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057941149.1
GCAATTGGGAGTCAAAACTTGGGGCGAATATATGGGCATTTCGCAGCCCATATCAATTCACTACATCCCACGATTTTAAGGAAGCGTTTGAAAGATTTAAGAACATTTTGTGGCACGCTTTTAACTAAACGATTCGAACTCGCTTCAGTAAAGCCCTACAGGCTGCGAATTCCTGTATCCTCTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCTCTTTCTCTAGGTAAATAATTAAGGAAAGATGGGGATCATAG...

XM_057941148.1
CTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCTCTTTCTCTAGGTAACATTTTGATTCAGTTATGTATATGTGCATGGCCATAGATGTATATGAGTGTGGATTGACATATCAAGTATATCGACGAGAATTCTGGATTCCGATAGGTTGTATGTATTTGCATCGAACAATTAATCTTAGCTGAAGCATTGCGGAAAGTGTTTATGTGCAGTAAATAATTAAGGAAAGATGGGGATCATAGAAAAGATTAAGGAAAT...

CDS

2 records

下载 CDS FASTA

LOC131013124
ATGGGGATCATAGAAAAGATTAAGGAAATTGAAGCCGAGATGGCTCGGACTCAGAAAAATAAAGCCACAGAATATCATTTGGGTCAGCTCAAGGCTAAGATAGCAAAGCTGAGGACACAACTGTTGGAGCCTCCAAAAGGAGCTAGTGGAGGTGGTGAGGGCTTTGAAGTTTCAAAATACGGGCATGGCCGTGTCGCACTGATAGGTTTTCCCAGTGTTGGGAAATCTACACTTTTAACTATGTTGACGGGAACGCATTC...

Protein

2 records

下载 Protein FASTA

XP_057797131.1
MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGASGGGEGFEVSKYGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTKELEAVGLRLNKTPPQIYFKKKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDLIDVIEGNRKYIKCVYVYNKIDVIGIDDVDRLA...

XP_057797132.1
MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGASGGGEGFEVSKYGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTKELEAVGLRLNKTPPQIYFKKKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDLIDVIEGNRKYIKCVYVYNKIDVIGIDDVDRLA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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