当前解析结果
SmilChr02G004431| 统一新 Gene ID | SmilChr02G004431 |
|---|---|
| 名称 | SmilChr02G004431 |
| 描述 | cytosolic enolase 3-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 66663173 - 66665779 / - |
| NCBI Gene ID | LOC131013185 |
|---|---|
| GeneID | 131013185 |
| locus_tag | - |
| NCBI Name | LOC131013185 |
| 原始查询 | LOC131013185 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cytosolic enolase 3-like |
| 产物 | cytosolic enolase 3-like |
| Arabidopsis | AT2G29560 (ENOC)cytosolic enolase [Source:NCBI gene (formerly Entrezgene);Acc:817505] identity=64.1; qcov=0.716; evalue=1.13e-28; confidence=medium |
| Rice | Os06g0136600 (OsEno5)- identity=53.9; qcov=0.716; evalue=5.66e-25; confidence=medium |
| GO | GO:0000015 (phosphopyruvate hydratase complex); GO:0000287 (magnesium ion binding); GO:0004634 (phosphopyruvate hydratase activity); GO:0006096 (glycolytic process) |
| KEGG | - |
| Pfam | PF00113 (Enolase_C); PF03952 (Enolase_N) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131013185 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.80000 | XP_057797225.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057797229.1 |
| 3 | Nucleus | 细胞核 | 0.80000 | XP_057797230.1 |
| 4 | Secreted | 分泌到胞外 | 0.20000 | XP_057797225.1 |
| 5 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057797229.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:66664155 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr2:66664170 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr2:66664178 |
T |
TC |
1bp_insertion | frameshift_variant | 2 | A5,B81 |
Chr2:66664178 |
T |
TC |
1bp_insertion | CDS_variant | 2 | A5,B81 |
Chr2:66664229 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B20 |
Chr2:66664240 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr2:66664348 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B15,C74,C77 |
Chr2:66664364 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C24,C56,C78 |
Chr2:66664387 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr2:66664402 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D9 |
Chr2:66664719 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B122,B30,B41,C23 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057797225.1PF03952
Enolase_N 2-77 aa
PF00113
Enolase_C 86-139 aa
XP_057797226.1PF03952
Enolase_N 2-77 aa
PF00113
Enolase_C 86-139 aa
XP_057797227.1PF03952
Enolase_N 2-77 aa
PF00113
Enolase_C 86-139 aa
XP_057797228.1PF03952
Enolase_N 2-77 aa
XP_057797229.1PF03952
Enolase_N 2-77 aa
XP_057797230.1PF00113
Enolase_C 28-81 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057797225.1 |
Pfam | PF03952 |
Enolase_N | Domain | 2 | 77 | 2.2e-26 | 93.3 | Enolase, N-terminal domain |
XP_057797225.1 |
Pfam | PF00113 |
Enolase_C | Domain | 86 | 139 | 9.9e-15 | 55.3 | Enolase, C-terminal TIM barrel domain |
XP_057797226.1 |
Pfam | PF03952 |
Enolase_N | Domain | 2 | 77 | 2.2e-26 | 93.3 | Enolase, N-terminal domain |
XP_057797226.1 |
Pfam | PF00113 |
Enolase_C | Domain | 86 | 139 | 9.9e-15 | 55.3 | Enolase, C-terminal TIM barrel domain |
XP_057797227.1 |
Pfam | PF03952 |
Enolase_N | Domain | 2 | 77 | 2.2e-26 | 93.3 | Enolase, N-terminal domain |
XP_057797227.1 |
Pfam | PF00113 |
Enolase_C | Domain | 86 | 139 | 9.9e-15 | 55.3 | Enolase, C-terminal TIM barrel domain |
XP_057797228.1 |
Pfam | PF03952 |
Enolase_N | Domain | 2 | 77 | 2e-26 | 93.4 | Enolase, N-terminal domain |
XP_057797229.1 |
Pfam | PF03952 |
Enolase_N | Domain | 2 | 77 | 1.7e-26 | 93.6 | Enolase, N-terminal domain |
XP_057797230.1 |
Pfam | PF00113 |
Enolase_C | Domain | 28 | 81 | 4.3e-15 | 56.5 | Enolase, C-terminal TIM barrel domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
6 records
下载 cDNA FASTA6 records
下载 CDS FASTA6 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。