当前解析结果
SmilChr02G002540| 统一新 Gene ID | SmilChr02G002540 |
|---|---|
| 名称 | SmilChr02G002540 |
| 描述 | uncharacterized SmilChr02G002540 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 44229787 - 44232802 / - |
| NCBI Gene ID | LOC131013632 |
|---|---|
| GeneID | 131013632 |
| locus_tag | - |
| NCBI Name | LOC131013632 |
| 原始查询 | LOC131013632 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839908]; symbol=AT1G30280; hit=AT1G30280; species=arabidopsis; confidence=low |
| 产物 | Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839908]; symbol=AT1G30280; hit=AT1G30280; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G30280 (AT1G30280)Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839908] identity=34.2; qcov=1.09; evalue=1.15e-51; confidence=low |
| Rice | Os03g0198300 (OsDjC25)- identity=55.3; qcov=0.223; evalue=1.36e-30; confidence=weak |
| GO | GO:0005737 (cytoplasm); GO:0030276 (clathrin binding); GO:0031982 (vesicle); GO:0043231 (intracellular membrane-bounded organelle); GO:0072318 (clathrin coat disassembly); GO:0072583 (clathrin-dependent endocytosis) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131013632 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057797745.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057797745.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057797745.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057797745.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057797745.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:44230136 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A6,B110,B36,B51,C37 |
Chr2:44231396 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C41 |
Chr2:44232309 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A10,B118,C82,D4 |
Chr2:44232437 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C30,C40,C85 |
Chr2:44232445 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B118,B41,B61,C51 |
Chr2:44232506 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。