Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G001943`

染色体: Chr03 坐标: 27682189-27688371 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G001943`
名称	SmilChr03G001943
描述	lysophospholipid acyltransferase 1-like
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	27682189 - 27688371 / `-`

ID 对照

NCBI Gene ID	`LOC131013993`
GeneID	`131013993`
locus_tag	`-`
NCBI Name	`LOC131013993`
原始查询	`LOC131013993`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	lysophospholipid acyltransferase 1-like
产物	lysophospholipid acyltransferase 1-like
Arabidopsis	`AT1G12640` (LPLAT1) MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:837820] identity=80.2; qcov=0.93; evalue=5.34e-119; confidence=high
Rice	`Os02g0676000` - identity=75; qcov=0.93; evalue=2.8e-116; confidence=high
GO	GO:0005783 (endoplasmic reticulum); GO:0008654 (phospholipid biosynthetic process); GO:0016020 (membrane); GO:0016746 (acyltransferase activity); GO:0019432 (triglyceride biosynthetic process); GO:0030258 (lipid modification)
KEGG	smil00561 (Glycerolipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00565 (Ether lipid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage))
Pfam	PF03062 (MBOAT)
InterPro	-
eggNOG	-
NR	GeneID:131013993

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057797912.1`
2	Endoplasmic reticulum membrane	内质网膜	0.80000	`XP_057797912.1`
3	Mitochondrion membrane	线粒体膜	0.20000	`XP_057797912.1`
4	Nucleus	细胞核	0.00000	`XP_057797912.1`
5	Chromosome	染色体	0.00000	`XP_057797912.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057797912.1

235 aa

118

235

MBOAT

PF03062 MBOAT 6-216 aa

XP_057797913.1

235 aa

118

235

MBOAT

PF03062 MBOAT 6-216 aa

XP_057797914.1

228 aa

114

228

MBOAT

PF03062 MBOAT 2-209 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057797912.1`	Pfam	`PF03062`	MBOAT	Family	6	216	1.4e-35	123.9	MBOAT, membrane-bound O-acyltransferase family
`XP_057797913.1`	Pfam	`PF03062`	MBOAT	Family	6	216	1.4e-35	123.9	MBOAT, membrane-bound O-acyltransferase family
`XP_057797914.1`	Pfam	`PF03062`	MBOAT	Family	2	209	4.5e-35	122.2	MBOAT, membrane-bound O-acyltransferase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057941931.1
CCAAAATCAACAAGGAAGAAGGAAATAGATTCGCCTCTGCTCGCCGTTTATCTGCCTGTTGCGCCGCCACCCCTGCAGCCCTGCTCACCGAGGCGCCGCCACCCCTGCAGCCCTTCTCACCTAGGTCACCGCCCTTTTACGTCAGCAAAAGGAGGACGGCCGTTCGCCCTTCCTCTGCCAATCGCCTAGGGCTTTATCTGCCGCCCTCTCGCCCTTTCGCCTCCACCTGTCGCTAGCGAGTGTACCTCCTCCGGTTGCCG...

XM_057941930.1
CCATCACCTTTGACTGATAATTGTAGCCATCTTGTTTGGGTTTAGAAATAAAAGAGGGGAGGGGCATCTCTCTATTTAGTGGTTCTATATGCCCTTAAAAAGTGACATGAGAGTGCTATTTCTTAAACTATACACTGTAGCAGCAGGGACGCTCTGACTTTTTTAGTGAAGTATGTAACGGGAATGGCTGGTTTTAGTATGGGGTCTCTTTAGGGGGGAAATGTTCCCTGAGAAAAGGCTACCAAAAGAATGATGAGCTT...

CDS

3 records

下载 CDS FASTA

LOC131013993
ATGTGTAGCCATGTATACTACATGAGTGGTGATGCATGGAAGGAAGGAGGTATTGATGCTACAGGTGCTCTGATGGTGATAACTCTGAAAATTATATCATGTGTCATAAACTATAATGATGGAATTCTCAAAGAGGATGATCTACGTGAAGCACAAAAGAAAAATTGGTTGCTGAAGATGCCATCATTACTGGAGTACTTTGGGTTCTGTCTATGTTGTGGAAGTCACTTTGCCGGTCCTGTTTATGAAATGAAAGACTA...

Protein

3 records

下载 Protein FASTA

XP_057797912.1
MCSHVYYMSGDAWKEGGIDATGALMVITLKIISCVINYNDGILKEDDLREAQKKNWLLKMPSLLEYFGFCLCCGSHFAGPVYEMKDYIEWTERKGIWQPSAKGQSPSPYWATLRALLQSAICMGLYLYLVPHFPLSRFTEPVYQEYGFFKKLSYQYMSGFTARWKYYFIWSISEASTIISGLGFSGWTDSNPPKPKWDRAINVDILGLELAKSAVQIPVYHLCGIFKSAPGLGTV

XP_057797913.1
MCSHVYYMSGDAWKEGGIDATGALMVITLKIISCVINYNDGILKEDDLREAQKKNWLLKMPSLLEYFGFCLCCGSHFAGPVYEMKDYIEWTERKGIWQPSAKGQSPSPYWATLRALLQSAICMGLYLYLVPHFPLSRFTEPVYQEYGFFKKLSYQYMSGFTARWKYYFIWSISEASTIISGLGFSGWTDSNPPKPKWDRAINVDILGLELAKSAVQIPVYHLCGIFKSAPGLGTV

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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JBrowse

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