当前解析结果
SmilChr03G003333| 统一新 Gene ID | SmilChr03G003333 |
|---|---|
| 名称 | SmilChr03G003333 |
| 描述 | mitochondrial ATP-independent inner membrane protease subunit 2-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 51600017 - 51606714 / + |
| NCBI Gene ID | LOC131014227 |
|---|---|
| GeneID | 131014227 |
| locus_tag | - |
| NCBI Name | LOC131014227 |
| 原始查询 | LOC131014227 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | mitochondrial ATP-independent inner membrane protease subunit 2-like |
| 产物 | mitochondrial ATP-independent inner membrane protease subunit 2-like |
| Arabidopsis | AT2G31140 (AT2G31140)Peptidase S24/S26A/S26B/S26C family protein [Source:NCBI gene (formerly Entrezgene);Acc:817670] identity=57.1; qcov=0.858; evalue=3.59e-87; confidence=high |
| Rice | Os04g0102600- identity=63.4; qcov=0.858; evalue=5.21e-94; confidence=high |
| GO | GO:0004252 (serine-type endopeptidase activity); GO:0006465 (GO:0006465) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131014227 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057798100.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057798100.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.60000 | XP_057798100.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057798100.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057798100.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:51600166 |
C |
CA |
1bp_insertion | frameshift_variant | 2 | B15,C18 |
Chr3:51600166 |
C |
CA |
1bp_insertion | CDS_variant | 2 | B15,C18 |
Chr3:51602295 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | C45,C58,C85,D3 |
Chr3:51604950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr3:51605119 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr3:51605121 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B138,B55 |
Chr3:51606170 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B138,B55 |
Chr3:51606182 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr3:51606221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr3:51606249 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C46 |
Chr3:51606350 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C38 |
Chr3:51606361 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B114 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。