Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003583`

染色体: Chr03 坐标: 54456040-54466746 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003583`
名称	SmilChr03G003583
描述	K(+) efflux antiporter 5
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	54456040 - 54466746 / `-`

ID 对照

NCBI Gene ID	`LOC131014463`
GeneID	`131014463`
locus_tag	`-`
NCBI Name	`LOC131014463`
原始查询	`LOC131014463`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	K(+) efflux antiporter 5
产物	K(+) efflux antiporter 5
Arabidopsis	`AT5G51710` (KEA5) K+ efflux antiporter 5 [Source:NCBI gene (formerly Entrezgene);Acc:835245] identity=82.7; qcov=0.931; evalue=0; confidence=high
Rice	`Os06g0561200` - identity=68.6; qcov=0.889; evalue=0; confidence=high
GO	GO:0015386 (potassium:proton antiporter activity); GO:0016020 (membrane); GO:0071805 (potassium ion transmembrane transport); GO:1902600 (proton transmembrane transport)
KEGG	-
Pfam	PF00999 (Na_H_Exchanger)
InterPro	-
eggNOG	-
NR	GeneID:131014463

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057798433.1`
2	Trans-golgi network	Trans-golgi network	0.80000	`XP_057798433.1`
3	Vacuole	液泡	0.40000	`XP_057798433.1`
4	Vacuole membrane	液泡膜	0.40000	`XP_057798433.1`
5	Endoplasmic reticulum	内质网	0.20000	`XP_057798433.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:54458664`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B19
`Chr3:54459507`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B140
`Chr3:54461996`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B117,B125,B128,C73,D11
`Chr3:54462406`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C64,C66
`Chr3:54463222`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr3:54466465`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B99
`Chr3:54466468`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B17,B57,D1
`Chr3:54466533`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr3:54466581`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A22,B58,C57,C83

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798433.1

580 aa

290

580

Na_H_Exchanger

PF00999 Na_H_Exchanger 170-548 aa

XP_057798434.1

578 aa

289

578

Na_H_Exchanger

PF00999 Na_H_Exchanger 170-548 aa

XP_057798435.1

568 aa

284

568

Na_H_Exchanger

PF00999 Na_H_Exchanger 170-536 aa

XP_057798436.1

566 aa

283

566

Na_H_Exchanger

PF00999 Na_H_Exchanger 170-536 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057798433.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	170	548	3e-66	224.5	Sodium/hydrogen exchanger, transmembrane
`XP_057798434.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	170	548	3e-66	224.5	Sodium/hydrogen exchanger, transmembrane
`XP_057798435.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	170	536	1.8e-71	241.7	Sodium/hydrogen exchanger, transmembrane
`XP_057798436.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	170	536	1.8e-71	241.7	Sodium/hydrogen exchanger, transmembrane

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057942452.1
AGCAACAACTGGAAACACCACACAACCTATTCGCGCCATATATCAAAATAGCTAACCCACCATTTAAAGTCATTTTCCCTTTCTCTTTTACATTAGTAAGATCTCAATATTTTGCTCAAAAATTCAATTTTCAGGGCAATGAGGACAAGAAAGGATTGTGGAATCCTAATTACTAGTATTTCGTTAATTCTCATTTTCTGCGCAAAATCAAGTCATTCGGCTAGATCGAAGCAAGAAATCAGGGAAGAATTCTTTGGCGA...

XM_057942453.1
AGCAACAACTGGAAACACCACACAACCTATTCGCGCCATATATCAAAATAGCTAACCCACCATTTAAAGTCATTTTCCCTTTCTCTTTTACATTAGTAAGATCTCAATATTTTGCTCAAAAATTCAATTTTCAGGGCAATGAGGACAAGAAAGGATTGTGGAATCCTAATTACTAGTATTTCGTTAATTCTCATTTTCTGCGCAAAATCAAGTCATTCGGCTAGATCGAAGCAAGAAATCAGGGAAGAATTCTTTGGCGA...

CDS

4 records

下载 CDS FASTA

LOC131014463
ATGAGGACAAGAAAGGATTGTGGAATCCTAATTACTAGTATTTCGTTAATTCTCATTTTCTGCGCAAAATCAAGTCATTCGGCTAGATCGAAGCAAGAAATCAGGGAAGAATTCTTTGGCGATCTAATTAATACGACGGCGACGGAAGATGGCGAAGCTAGTATCGCCAAGATGTTTGATCGTGTGTTGGAGAAAGAGTTCTCAGAGAATGATCAACCTGAAGGTTCTGGGGAAAGCAGTTTCAACAGTAGTGTGGCAGA...

Protein

4 records

下载 Protein FASTA

XP_057798433.1
MRTRKDCGILITSISLILIFCAKSSHSARSKQEIREEFFGDLINTTATEDGEASIAKMFDRVLEKEFSENDQPEGSGESSFNSSVADQQAELETVAKITHEKIKKNESNEANGTKPFQFQDVFSLENEDSDDMATLIDRKDNVFVMSNKKSKYPVLQVDFRLISDLVVVIVSAATGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFGLGLEFSLAKLKVVGPVAVLGGLLQIIILIFLCGM...

XP_057798434.1
MRTRKDCGILITSISLILIFCAKSSHSARSKQEIREEFFGDLINTTATEDGEASIAKMFDRVLEKEFSENDQPEGSGESSFNSSVADQQAELETVAKITHEKIKKNESNEANGTKPFQFQDVFSLENEDSDDMATLIDRKDNVFVMSNKKSKYPVLQVDFRLISDLVVVIVSAATGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFGLGLEFSLAKLKVVGPVAVLGGLLQIIILIFLCGM...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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