Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003693`

染色体: Chr03 坐标: 55866632-55868608 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003693`
名称	SmilChr03G003693
描述	uncharacterized SmilChr03G003693
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	55866632 - 55868608 / `+`

ID 对照

NCBI Gene ID	`LOC131014560`
GeneID	`131014560`
locus_tag	`-`
NCBI Name	`LOC131014560`
原始查询	`LOC131014560`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	Endosomal targeting BRO1-like domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:831250]; symbol=AT5G14020; hit=AT5G14020; species=arabidopsis; confidence=low
产物	Endosomal targeting BRO1-like domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:831250]; symbol=AT5G14020; hit=AT5G14020; species=arabidopsis; confidence=low
Arabidopsis	`AT5G14020` (AT5G14020) Endosomal targeting BRO1-like domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:831250] identity=39.8; qcov=0.889; evalue=4.57e-07; confidence=low
Rice	`-` -
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131014560

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057798552.1`
2	Cytoplasm	细胞质	0.60000	`XP_057798552.1`
3	Nucleolus	核仁	0.40000	`XP_057798553.1`
4	Chromosome	染色体	0.40000	`XP_057798552.1`
5	Mitochondrion	线粒体	0.40000	`XP_057798553.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:55867677`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr3:55867847`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B132,B26
`Chr3:55867890`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C4
`Chr3:55867900`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B74
`Chr3:55867928`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A8,B101,B97,C18
`Chr3:55868044`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B58
`Chr3:55868048`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:55868051`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B140
`Chr3:55868071`	`C`	`T`	EMS_canonical_SNV	stop_gained	3	B101,B26,B97
`Chr3:55868071`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B101,B26,B97
`Chr3:55868145`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B59,C4
`Chr3:55868211`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A8,B101,B97,C18

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XR_009098258.1
TTAAATATTTTTCTCTCCCGATTATCAAATCCTCCCAATTATCAAATCCGATTCCCCTTTCCCCTCCCCGTCTCTCACACCATACATTCCCCTCCCTCCGCCGCCATTCACTGTACTCCGTCACATTGAATTTTACAGCCAACACTACTTTTCTTCTATTTTTTGCTCCGTTTTTTCTTCTTATTTGCTATTGAAATGCCTTGAAATAAATGATAGATTTTTATTACATACACATCAAGAATCAGGTTCAAGCTTTATTG...

XR_009098257.1
TATTTTTCTCTCCCGATTATCAAATCCTCCCAATTATCAAATCCGATTCCCCTTTCCCCTCCCCGTCTCTCACACCATACATTCCCCTCCCTCCGCCGCCATTCACTGTACTCCGTCACATTGAATTTTACAGCCAACACTACTTTTCTTCTATTTTTTGCTCCGTTTTTTCTTCTTATTTGCTATTGAAATGCCTTGAAATAAATGATAGATTTTTATTACATACACATCAAGAATCAGCAATCGAAGCAAGAAGGAAA...

CDS

2 records

下载 CDS FASTA

LOC131014560
ATGATGGCAATGCTGACACTGATCGAGGCAAATGAGAAGCTAATTCCTAAAAAAAATTGCATGAGAGATGCTGTTGATTTGCTGCTGAAAGCAGAAGGGTATTTGAATTTTTATGTTCTTGATGTTCTTCCACAGCTAGCACCTGAGATAAAGTGCATAAAATCATTCTTGAGATCGAAGAAGCTGCCTTCGGATAAGCCTTTGGATATGCAGGGGCACATGCTAGAAGCGATTTTACATCAAGCACTGGCACAAGTAGA...

LOC131014560
ATGATGGCAATGCTGACACTGATCGAGGCAAATGAGAAGCTAATTCCTAAAAAAAATTGCATGAGAGATGCTGTTGATTTGCTGCTGAAAGCAGAAGGGAAGAAGCTGCCTTCGGATAAGCCTTTGGATATGCAGGGGCACATGCTAGAAGCGATTTTACATCAAGCACTGGCACAAGTAGAAGCTGCCTTCTATTACAACTTGAACAGAACAACAATCTTAAAAAACAGGCATGAAGTTGAAGTGTCTGAGCTTCATCC...

Protein

2 records

下载 Protein FASTA

XP_057798552.1
MMAMLTLIEANEKLIPKKNCMRDAVDLLLKAEGYLNFYVLDVLPQLAPEIKCIKSFLRSKKLPSDKPLDMQGHMLEAILHQALAQVEAAFYYNLNRTTILKNRHEVEVSELHPLRLRLLREKKTR

XP_057798553.1
MMAMLTLIEANEKLIPKKNCMRDAVDLLLKAEGKKLPSDKPLDMQGHMLEAILHQALAQVEAAFYYNLNRTTILKNRHEVEVSELHPLRLRLLREKKTR

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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