Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003792`

染色体: Chr03 坐标: 57011179-57024534 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003792`
名称	SmilChr03G003792
描述	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	57011179 - 57024534 / `-`

ID 对照

NCBI Gene ID	`LOC131014645`
GeneID	`131014645`
locus_tag	`-`
NCBI Name	`LOC131014645`
原始查询	`LOC131014645`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
产物	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
Arabidopsis	`AT5G38280` (PR5K) PR5-like receptor kinase [Source:NCBI gene (formerly Entrezgene);Acc:833810] identity=51.5; qcov=0.439; evalue=1.63e-106; confidence=low
Rice	`Os01g0116400` - identity=36.4; qcov=1.01; evalue=6.77e-132; confidence=medium
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0030247 (polysaccharide binding)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr); PF13947 (GUB_WAK_bind)
InterPro	-
eggNOG	-
NR	GeneID:131014645

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057798667.1`
2	Nucleus	细胞核	0.00000	`XP_057798667.1`
3	Chromosome	染色体	0.00000	`XP_057798667.1`
4	Centromere	着丝粒	0.00000	`XP_057798667.1`
5	Chromatin	染色质	0.00000	`XP_057798667.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:57011379`	`G`	`A`	EMS_canonical_SNV	stop_gained	8	A13,B134,B34,B38,B39,B65,B86,C49
`Chr3:57011388`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B4
`Chr3:57011388`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B4
`Chr3:57011390`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B79,C58,C9
`Chr3:57011404`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A4,B85,C81
`Chr3:57011460`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B66,C40
`Chr3:57011522`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C8
`Chr3:57011621`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B2,C45,C83
`Chr3:57011635`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B2,B24,C38,C46,C62
`Chr3:57011636`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B135
`Chr3:57011653`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B75
`Chr3:57011750`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B68,B99,C14,C44

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798667.1

713 aa

356

713

GUB_WAK_bind

PK_Tyr_Ser-Thr

Pkinase

PF13947 GUB_WAK_bind 31-97 aa PF07714 PK_Tyr_Ser-Thr 385-658 aa PF00069 Pkinase 386-656 aa

XP_057798668.1

703 aa

352

703

GUB_WAK_bind

PK_Tyr_Ser-Thr

Pkinase

PF13947 GUB_WAK_bind 31-97 aa PF07714 PK_Tyr_Ser-Thr 375-648 aa PF00069 Pkinase 376-646 aa

XP_057798669.1

699 aa

350

699

GUB_WAK_bind

PK_Tyr_Ser-Thr

Pkinase

PF13947 GUB_WAK_bind 31-97 aa PF07714 PK_Tyr_Ser-Thr 371-644 aa PF00069 Pkinase 372-642 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057798667.1`	Pfam	`PF13947`	GUB_WAK_bind	Domain	31	97	3.5e-13	50.4	Wall-associated receptor kinase galacturonan-binding
`XP_057798667.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	385	658	9.5e-46	156.9	Protein tyrosine and serine/threonine kinase
`XP_057798667.1`	Pfam	`PF00069`	Pkinase	Domain	386	656	3e-44	152.1	Protein kinase domain
`XP_057798668.1`	Pfam	`PF13947`	GUB_WAK_bind	Domain	31	97	3.4e-13	50.5	Wall-associated receptor kinase galacturonan-binding
`XP_057798668.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	375	648	9.2e-46	156.9	Protein tyrosine and serine/threonine kinase
`XP_057798668.1`	Pfam	`PF00069`	Pkinase	Domain	376	646	2.9e-44	152.1	Protein kinase domain
`XP_057798669.1`	Pfam	`PF13947`	GUB_WAK_bind	Domain	31	97	3.4e-13	50.5	Wall-associated receptor kinase galacturonan-binding
`XP_057798669.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	371	644	9.1e-46	157.0	Protein tyrosine and serine/threonine kinase
`XP_057798669.1`	Pfam	`PF00069`	Pkinase	Domain	372	642	2.9e-44	152.2	Protein kinase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057942685.1
GCTGCATCATATATATATCTCCTCCAAAAAGAGTATAGACTGCAAAATCAATTGCCGTCTAAACCATGATCACTCAAAACCTCATCTTCCTCGCCACTTCATCTCTCTTCATTCTCTCACTACTCCATAATTTGTTTCAAACCGGTGAAGCAAACTGCACCCCATCTGCCTGCGGCATTATTCGCAACATCAGCCACCCTTTACGCCTCAAGGGCGATCCCAGCAACTGCGGTGATCGCAGATTTGAGTTAACCTGCGAA...

XM_057942684.1
GCTGCATCATATATATATCTCCTCCAAAAAGAGTATAGACTGCAAAATCAATTGCCGTCTAAACCATGATCACTCAAAACCTCATCTTCCTCGCCACTTCATCTCTCTTCATTCTCTCACTACTCCATAATTTGTTTCAAACCGGTGAAGCAAACTGCACCCCATCTGCCTGCGGCATTATTCGCAACATCAGCCACCCTTTACGCCTCAAGGGCGATCCCAGCAACTGCGGTGATCGCAGATTTGAGTTAACCTGCGAA...

CDS

3 records

下载 CDS FASTA

LOC131014645
ATGATCACTCAAAACCTCATCTTCCTCGCCACTTCATCTCTCTTCATTCTCTCACTACTCCATAATTTGTTTCAAACCGGTGAAGCAAACTGCACCCCATCTGCCTGCGGCATTATTCGCAACATCAGCCACCCTTTACGCCTCAAGGGCGATCCCAGCAACTGCGGTGATCGCAGATTTGAGTTAACCTGCGAAAACAATGTGACCTCCATCTATCTTAACTCTCACAAATACTATGTCAAAGCAATCAACTACAGCAA...

Protein

3 records

下载 Protein FASTA

XP_057798667.1
MITQNLIFLATSSLFILSLLHNLFQTGEANCTPSACGIIRNISHPLRLKGDPSNCGDRRFELTCENNVTSIYLNSHKYYVKAINYSNGYDNPTIRLADASINNDDLCSFPTLSIDAYNFTYENPYPINYVILSYSSYPYDPLPINFISCPNPLTNSSLFTDITNLCASNSSNRRYAYIKVGHMKLSELPYMCYVEVIVMTSWQEFKDFNNVSLSEIHHSLLYGFELMVCPGCGIRISTESVKFIKFFLEFLLILAVIVGL...

XP_057798668.1
MITQNLIFLATSSLFILSLLHNLFQTGEANCTPSACGIIRNISHPLRLKGDPSNCGDRRFELTCENNVTSIYLNSHKYYVKAINYSNGYDNPTIRLADASINNDDLCSFPTLSIDAYNFTYENPYPINYVILSYSSYPYDPLPINFISCPNPLTNSSLFTDITNLCASNSSNRRYAYIKVGHMKLSELPYMCYVEVIVMTSWQEFKDFNNVSLSEIHHSLLYGFELMVCPGCGIRISTESVKFIKFFLGLLCAVASPPVF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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