Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002239`

染色体: Chr01 坐标: 38935535-38938339 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002239`
名称	SmilChr01G002239
描述	ADP,ATP carrier protein, mitochondrial
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	38935535 - 38938339 / `-`

ID 对照

NCBI Gene ID	`LOC131014701`
GeneID	`131014701`
locus_tag	`-`
NCBI Name	`LOC131014701`
原始查询	`LOC131014701`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ADP,ATP carrier protein, mitochondrial
产物	ADP%2CATP carrier protein%2C mitochondrial
Arabidopsis	`AT5G13490` (AAC2) ADP/ATP carrier 2 [Source:NCBI gene (formerly Entrezgene);Acc:831193] identity=81.6; qcov=1.01; evalue=0; confidence=high
Rice	`Os02g0718900` (ant) - identity=79.7; qcov=1; evalue=0; confidence=high
GO	GO:0005471 (ATP:ADP antiporter activity); GO:0005743 (mitochondrial inner membrane); GO:0140021 (mitochondrial ADP transmembrane transport); GO:1990544 (mitochondrial ATP transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131014701

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057798743.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057798743.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057798743.1`
4	Nucleus	细胞核	0.00000	`XP_057798743.1`
5	Chromosome	染色体	0.00000	`XP_057798743.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:38935749`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A15,B121,B24,C85
`Chr1:38936167`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr1:38936380`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A20,B18
`Chr1:38936872`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B139,D2
`Chr1:38936881`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B22,B41
`Chr1:38937018`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798743.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 87-182 aa PF00153 Mito_carr 190-284 aa PF00153 Mito_carr 290-379 aa

XP_057798753.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 87-182 aa PF00153 Mito_carr 190-284 aa PF00153 Mito_carr 290-379 aa

XP_057798761.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 87-182 aa PF00153 Mito_carr 190-284 aa PF00153 Mito_carr 290-379 aa

XP_057798768.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 87-182 aa PF00153 Mito_carr 190-284 aa PF00153 Mito_carr 290-379 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057798743.1`	Pfam	`PF00153`	Mito_carr	Repeat	87	182	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798743.1`	Pfam	`PF00153`	Mito_carr	Repeat	190	284	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798743.1`	Pfam	`PF00153`	Mito_carr	Repeat	290	379	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798753.1`	Pfam	`PF00153`	Mito_carr	Repeat	87	182	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798753.1`	Pfam	`PF00153`	Mito_carr	Repeat	190	284	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798753.1`	Pfam	`PF00153`	Mito_carr	Repeat	290	379	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798761.1`	Pfam	`PF00153`	Mito_carr	Repeat	87	182	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798761.1`	Pfam	`PF00153`	Mito_carr	Repeat	190	284	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798761.1`	Pfam	`PF00153`	Mito_carr	Repeat	290	379	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798768.1`	Pfam	`PF00153`	Mito_carr	Repeat	87	182	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798768.1`	Pfam	`PF00153`	Mito_carr	Repeat	190	284	1.3e-68	227.5	Mitochondrial carrier protein
`XP_057798768.1`	Pfam	`PF00153`	Mito_carr	Repeat	290	379	1.3e-68	227.5	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057942778.1
ATCGAATCGAATAACATTTAGGAATTCCCCAGCCCACCCAATTAAGGCCCACGATCCGGCCATTTCGACCGGCAGCAATTTTGACATGCTCCGCGGCGCAGCGTATTACCATGCGTCCTTCCCAGTGAGATTCACGCTAGGTATTCACCTTGACCAGCTACTATAAAAGAGGCAGCTGCAGCCCCCTTCTTTGGACTCTTTCACTCCTCTCTCCTCGGTCTTCTCTCCTCCAATCCCCCATCATTTTCATCCCCCCTTTT...

XM_057942760.1
AGGTATTCACCTTGACCAGCTACTATAAAAGAGGCAGCTGCAGCCCCCTTCTTTGGACTCTTTCACTCCTCTCTCCTCGGTCTTCTCTCCTCCAATCCCCCATCATTTTCATCCCCCCTTTTCGAGGCGAGTCGACCGCAGGTAACATGGCAGATCAAAAACAATTCCCAACTATCTCCCAGAAGGTAGCCAACCAACTACATCTGGGATCCAGCATCTCACAAGTTCGTTATGGAGGTGTCCCACAACCTGCTGCATAT...

CDS

4 records

下载 CDS FASTA

LOC131014701
ATGGCAGATCAAAAACAATTCCCAACTATCTCCCAGAAGGTAGCCAACCAACTACATCTGGGATCCAGCATCTCACAAGTTCGTTATGGAGGTGTCCCACAACCTGCTGCATATCAGAGGCGATTTGCTTATGGCAATTATACAAACCAAGGTTTCCAATATCCTAAGACCTGCAGGGCAAGTCAGGATCTGGCATTGATCTCTGCGAATGCTTCCCCAGTTTTCGCTCAGGCTCCCTCAGAGAAAGGCTTAGCTGGCTT...

Protein

4 records

下载 Protein FASTA

XP_057798743.1
MADQKQFPTISQKVANQLHLGSSISQVRYGGVPQPAAYQRRFAYGNYTNQGFQYPKTCRASQDLALISANASPVFAQAPSEKGLAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGECFSRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKERDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGLAGLYRGFNI...

XP_057798753.1
MADQKQFPTISQKVANQLHLGSSISQVRYGGVPQPAAYQRRFAYGNYTNQGFQYPKTCRASQDLALISANASPVFAQAPSEKGLAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGECFSRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKERDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGLAGLYRGFNI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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