当前解析结果
SmilChr03G004012| 统一新 Gene ID | SmilChr03G004012 |
|---|---|
| 名称 | SmilChr03G004012 |
| 描述 | uncharacterized SmilChr03G004012 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 59106648 - 59109420 / + |
| NCBI Gene ID | LOC131014871 |
|---|---|
| GeneID | 131014871 |
| locus_tag | - |
| NCBI Name | LOC131014871 |
| 原始查询 | LOC131014871 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:828606]; symbol=AT4G25030; hit=AT4G25030; species=arabidopsis; confidence=high |
| 产物 | Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:828606]; symbol=AT4G25030; hit=AT4G25030; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G25030 (AT4G25030)Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:828606] identity=64.2; qcov=0.972; evalue=9.11e-144; confidence=high |
| Rice | Os07g0159500- identity=60.5; qcov=0.923; evalue=3.6e-120; confidence=high |
| GO | GO:0009507 (chloroplast) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131014871 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 0.80000 | XP_057798988.1 |
| 2 | Mitochondrion | 线粒体 | 0.40000 | XP_057798988.1 |
| 3 | Chloroplast membrane | 叶绿体膜 | 0.20000 | XP_057798988.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057798988.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057798988.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:59107995 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:59108042 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B119,B65 |
Chr3:59108054 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C13 |
Chr3:59108273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B85 |
Chr3:59108284 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B113,B52,C61 |
Chr3:59108320 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B28,B63 |
Chr3:59108405 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:59108445 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr3:59108648 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,B24,C36 |
Chr3:59108819 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B46 |
Chr3:59108919 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B51,C64,C66 |
Chr3:59108957 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B66,B93,C31,D3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。