Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002261`

染色体: Chr01 坐标: 39417632-39421661 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002261`
名称	SmilChr01G002261
描述	cytochrome P450 714C2-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	39417632 - 39421661 / `-`

ID 对照

NCBI Gene ID	`LOC131014879`
GeneID	`131014879`
locus_tag	`-`
NCBI Name	`LOC131014879`
原始查询	`LOC131014879`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	cytochrome P450 714C2-like
产物	cytochrome P450 714C2-like
Arabidopsis	`AT5G24910` (CYP714A1) cytochrome P450, family 714, subfamily A, polypeptide 1 [Source:NCBI gene (formerly Entrezgene);Acc:832560] identity=44.2; qcov=0.991; evalue=3.1e-124; confidence=medium
Rice	`Os12g0119000` (CYP714C2) - identity=47.6; qcov=0.972; evalue=1.58e-144; confidence=high
GO	GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding)
KEGG	-
Pfam	PF00067 (p450)
InterPro	-
eggNOG	-
NR	GeneID:131014879

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057798996.1`
2	Endoplasmic reticulum membrane	内质网膜	0.80000	`XP_057798996.1`
3	Nucleus	细胞核	0.00000	`XP_057798996.1`
4	Chromosome	染色体	0.00000	`XP_057798996.1`
5	Centromere	着丝粒	0.00000	`XP_057798996.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:39417830`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A1,A21,B130
`Chr1:39417870`	`GGA`	`G`	2bp_deletion	frameshift_variant	1	D11
`Chr1:39417870`	`GGA`	`G`	2bp_deletion	CDS_variant	1	D11
`Chr1:39418003`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B131
`Chr1:39418144`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A24,B33
`Chr1:39419687`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B93
`Chr1:39419695`	`AG`	`A`	1bp_deletion	frameshift_variant	2	B138,B81
`Chr1:39419695`	`AG`	`A`	1bp_deletion	CDS_variant	2	B138,B81
`Chr1:39419822`	`C`	`CT`	1bp_insertion	frameshift_variant	1	B100
`Chr1:39419822`	`C`	`CT`	1bp_insertion	CDS_variant	1	B100
`Chr1:39419842`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr1:39419931`	`C`	`CT`	1bp_insertion	frameshift_variant	23	A13,B1,B10,B102,B120,B128,B139,B16,B20,B24,B3,B36,B6,B7,B74,B97,C24,C28,C59,C6,C67,C81,C82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798996.1

525 aa

262

525

p450

PF00067 p450 88-509 aa

XP_057799001.1

432 aa

216

432

p450

PF00067 p450 7-416 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057798996.1`	Pfam	`PF00067`	p450	Domain	88	509	8.6e-85	285.9	Cytochrome P450
`XP_057799001.1`	Pfam	`PF00067`	p450	Domain	7	416	2.8e-81	274.4	Cytochrome P450

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057943013.1
TTAAAGCGTGACATGCATATAAGCATAGTATTCATCCGCTTGTTGCCCTGCATTTACAAAAAAGAAGCAACAAAGGATCACATTTTTGCTAATGGAGAATCATACTTTGCTTCAAATAATCGCATCTTTTGCTTTAGCATCGATTCTCGCACTACTTTTCCGGCTGTACGGAGCCATAGTGGCGGCGCCGCGGCGGCTGCGGCGAGTTCTGAGGCAGCAAGGCGTCGGAGGGCCGCCCCCATCTTTTCTACTCGGTAACC...

XM_057943018.1
TGCCCTGCATTTACAAAAAAGAAGCAACAAAGGATCACATTTTTGCTAATGGAGAATCATACTTTGCTTCAAATAATCGCATCTTTTGCTTTAGCATCGATTCTCGCACTACTTTTCCGGCTGTACGGAGCCATAGTGGCGGCGCCGCGGCGGCTGCGGCGAGTTCTGAGGCAGCAAGGCGTCGGAGGGCCGCCCCCATCTTTTCTACTCGGTAACCTCTCAGACATCAAAAAATCACGAACTTCCGCCGAGGCTGCCGC...

CDS

2 records

下载 CDS FASTA

LOC131014879
ATGGAGAATCATACTTTGCTTCAAATAATCGCATCTTTTGCTTTAGCATCGATTCTCGCACTACTTTTCCGGCTGTACGGAGCCATAGTGGCGGCGCCGCGGCGGCTGCGGCGAGTTCTGAGGCAGCAAGGCGTCGGAGGGCCGCCCCCATCTTTTCTACTCGGTAACCTCTCAGACATCAAAAAATCACGAACTTCCGCCGAGGCTGCCGCCGCCGTTGCCGCCGCTGTCGCATCACCGGCTTCTCATAACTGTGGAGC...

LOC131014879
ATGGAGGCGGCAATACGGTTGAGTGATATGTATACGTTTTCGCTGGGAAATAAACCAATACTAGTTGTGAACAAATATGATGTAATAAAAGAGGTGGTTACATGCATATCCCACGATTTGGCGAAACCTTATTCCGGATTAGATTTGGAATCTTTGTTTGGCAACGGCATTGTCACATCAAACGGCCAAATTTGGGCTCATCAGAGGAAGATTCTTGCTCCTCAACTGTTCACTGACAAAGTCAAGGCAATGACAAATTT...

Protein

2 records

下载 Protein FASTA

XP_057798996.1
MENHTLLQIIASFALASILALLFRLYGAIVAAPRRLRRVLRQQGVGGPPPSFLLGNLSDIKKSRTSAEAAAAVAAAVASPASHNCGAILFAVFNEWRRQYGDMYTFSLGNKPILVVNKYDVIKEVVTCISHDLAKPYSGLDLESLFGNGIVTSNGQIWAHQRKILAPQLFTDKVKAMTNLIEESALMLIESWKDVIDGEGGEADIKIDDYLQKFSGEVISRACFGSSYAEGEQLFQKLAALQKVTTKKGFSLGIPGMGYI...

XP_057799001.1
MEAAIRLSDMYTFSLGNKPILVVNKYDVIKEVVTCISHDLAKPYSGLDLESLFGNGIVTSNGQIWAHQRKILAPQLFTDKVKAMTNLIEESALMLIESWKDVIDGEGGEADIKIDDYLQKFSGEVISRACFGSSYAEGEQLFQKLAALQKVTTKKGFSLGIPGMGYIPTKHNRRSWELQGDVRELILKLLKQKKEANLEKNMLGVILEGAQSSNNSSLDTIDKFTIDNCKSIYFAGSESTATTASWCLMLLAANQEWQQR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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