当前解析结果
SmilChr01G002286| 统一新 Gene ID | SmilChr01G002286 |
|---|---|
| 名称 | SmilChr01G002286 |
| 描述 | dolichol-phosphate mannose synthase subunit 2 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 39664252 - 39667649 / - |
| NCBI Gene ID | LOC131015044 |
|---|---|
| GeneID | 131015044 |
| locus_tag | - |
| NCBI Name | LOC131015044 |
| 原始查询 | LOC131015044 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | dolichol-phosphate mannose synthase subunit 2 |
| 产物 | dolichol-phosphate mannose synthase subunit 2 |
| Arabidopsis | AT1G74340 (DPMS2)dolichol phosphate-mannose biosynthesis regulatory protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:843775] identity=87.5; qcov=1; evalue=9.93e-41; confidence=medium |
| Rice | Os11g0311550- identity=76.7; qcov=0.912; evalue=2.05e-36; confidence=medium |
| GO | GO:0005789 (endoplasmic reticulum membrane); GO:0006506 (GPI anchor biosynthetic process); GO:0019348 (GO:0019348); GO:0030234 (enzyme regulator activity); GO:0033185 (dolichol-phosphate-mannose synthase complex) |
| KEGG | smil00510 (N-Glycan biosynthesis - Salvia miltiorrhiza (redroot sage)); smil00563 (Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF07297 (DPM2) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015044 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057799227.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057799227.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057799227.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057799227.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057799227.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057799227.1PF07297
DPM2 4-78 aa
XP_057799234.1PF07297
DPM2 4-78 aa
XP_057799240.1PF07297
DPM2 4-78 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057799227.1 |
Pfam | PF07297 |
DPM2 | Family | 4 | 78 | 1.8e-34 | 118.5 | Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) |
XP_057799234.1 |
Pfam | PF07297 |
DPM2 | Family | 4 | 78 | 1.8e-34 | 118.5 | Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) |
XP_057799240.1 |
Pfam | PF07297 |
DPM2 | Family | 4 | 78 | 1.8e-34 | 118.5 | Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。