当前解析结果
SmilChr03G004404| 统一新 Gene ID | SmilChr03G004404 |
|---|---|
| 名称 | SmilChr03G004404 |
| 描述 | receptor kinase-like protein Xa21 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 62219453 - 62223547 / + |
| NCBI Gene ID | LOC131015274 |
|---|---|
| GeneID | 131015274 |
| locus_tag | - |
| NCBI Name | LOC131015274 |
| 原始查询 | LOC131015274 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | receptor kinase-like protein Xa21 |
| 产物 | receptor kinase-like protein Xa21 |
| Arabidopsis | AT2G26330 (ER)Leucine-rich receptor-like protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:817173] identity=36.5; qcov=0.883; evalue=2.18e-51; confidence=medium |
| Rice | Os11g0490200- identity=35.6; qcov=1.06; evalue=1.98e-57; confidence=medium |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | PF00560 (LRR_1); PF08263 (LRRNT_2); PF13855 (LRR_8) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015274 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057799583.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057799583.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057799583.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057799583.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057799583.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057799583.1PF08263
LRRNT_2 33-68 aa
PF13855
LRR_8 139-180 aa
PF13855
LRR_8 144-204 aa
PF00560
LRR_1 145-167 aa
PF00560
LRR_1 169-191 aa
PF00560
LRR_1 193-214 aa
PF00560
LRR_1 267-288 aa
PF00560
LRR_1 290-312 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057799583.1 |
Pfam | PF08263 |
LRRNT_2 | Family | 33 | 68 | 7.8e-06 | 26.8 | Leucine rich repeat N-terminal domain |
XP_057799583.1 |
Pfam | PF13855 |
LRR_8 | Repeat | 139 | 180 | 8.8e-19 | 67.7 | Leucine rich repeat |
XP_057799583.1 |
Pfam | PF13855 |
LRR_8 | Repeat | 144 | 204 | 8.8e-19 | 67.7 | Leucine rich repeat |
XP_057799583.1 |
Pfam | PF00560 |
LRR_1 | Repeat | 145 | 167 | 1.9e-26 | 87.1 | Leucine Rich Repeat |
XP_057799583.1 |
Pfam | PF00560 |
LRR_1 | Repeat | 169 | 191 | 1.9e-26 | 87.1 | Leucine Rich Repeat |
XP_057799583.1 |
Pfam | PF00560 |
LRR_1 | Repeat | 193 | 214 | 1.9e-26 | 87.1 | Leucine Rich Repeat |
XP_057799583.1 |
Pfam | PF00560 |
LRR_1 | Repeat | 267 | 288 | 1.9e-26 | 87.1 | Leucine Rich Repeat |
XP_057799583.1 |
Pfam | PF00560 |
LRR_1 | Repeat | 290 | 312 | 1.9e-26 | 87.1 | Leucine Rich Repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。