当前解析结果
SmilChr03G004587| 统一新 Gene ID | SmilChr03G004587 |
|---|---|
| 名称 | SmilChr03G004587 |
| 描述 | abscisic acid receptor PYL2-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 63714468 - 63716098 / - |
| NCBI Gene ID | LOC131015452 |
|---|---|
| GeneID | 131015452 |
| locus_tag | - |
| NCBI Name | LOC131015452 |
| 原始查询 | LOC131015452 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | abscisic acid receptor PYL2-like |
| 产物 | abscisic acid receptor PYL2-like |
| Arabidopsis | AT2G26040 (PYL2)PYR1-like 2 [Source:NCBI gene (formerly Entrezgene);Acc:817145] identity=74; qcov=0.948; evalue=1.31e-91; confidence=high |
| Rice | Os02g0226801 (OsPYL/RCAR2)- identity=67.4; qcov=0.932; evalue=1.35e-72; confidence=high |
| GO | GO:0004864 (protein phosphatase inhibitor activity); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0009738 (abscisic acid-activated signaling pathway); GO:0010427 (abscisic acid binding); GO:0038023 (signaling receptor activity); GO:0080163 (GO:0080163) |
| KEGG | smil04016 (MAPK signaling pathway - plant - Salvia miltiorrhiza (redroot sage)); smil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00407 (Bet_v_1); PF10604 (Polyketide_cyc2) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015452 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057799849.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057799849.1 |
| 3 | Cytoplasm | 细胞质 | 0.60000 | XP_057799849.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057799849.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057799849.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:63714862 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B1,B92,C10,C49 |
Chr3:63714864 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B84 |
Chr3:63714879 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B49,B79,B80,B95,C18 |
Chr3:63714943 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B16,C17,C45,D1 |
Chr3:63714949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B30 |
Chr3:63715170 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C51,C8 |
Chr3:63715318 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B112,D3 |
Chr3:63715393 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057799849.1PF10604
Polyketide_cyc2 41-159 aa
PF00407
Bet_v_1 63-139 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057799849.1 |
Pfam | PF10604 |
Polyketide_cyc2 | Family | 41 | 159 | 4.3e-14 | 53.6 | Polyketide cyclase / dehydrase and lipid transport |
XP_057799849.1 |
Pfam | PF00407 |
Bet_v_1 | Domain | 63 | 139 | 7.7e-05 | 23.4 | Pathogenesis-related protein Bet v 1 family |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。