Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002331`

染色体: Chr01 坐标: 40459444-40464008 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002331`
名称	SmilChr01G002331
描述	uncharacterized SmilChr01G002331
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	40459444 - 40464008 / `-`

ID 对照

NCBI Gene ID	`LOC131015493`
GeneID	`131015493`
locus_tag	`-`
NCBI Name	`LOC131015493`
原始查询	`LOC131015493`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	ATP-dependent caseinolytic protease/crotonase family protein [Source:NCBI gene (formerly Entrezgene);Acc:6241030]; symbol=AT4G16807; hit=AT4G16807; species=arabidopsis; confidence=low
产物	ATP-dependent caseinolytic protease/crotonase family protein [Source:NCBI gene (formerly Entrezgene);Acc:6241030]; symbol=AT4G16807; hit=AT4G16807; species=arabidopsis; confidence=low
Arabidopsis	`AT4G16807` (AT4G16807) ATP-dependent caseinolytic protease/crotonase family protein [Source:NCBI gene (formerly Entrezgene);Acc:6241030] identity=42.7; qcov=0.629; evalue=6.31e-19; confidence=low
Rice	`-` -
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131015493

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057799892.1`
2	Cytosol	细胞质基质	0.20000	`XP_057799902.1`
3	Chromosome	染色体	0.00000	`XP_057799892.1`
4	Centromere	着丝粒	0.00000	`XP_057799892.1`
5	Chromatin	染色质	0.00000	`XP_057799892.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:40460586`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C14,C74
`Chr1:40460707`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B12,B121,B13,B2
`Chr1:40460860`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A3,B113,B25
`Chr1:40460947`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B104,B131,B74,C28,C77
`Chr1:40460970`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B108,B56,B96,C23,D7
`Chr1:40461023`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C15
`Chr1:40461053`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B33,B8
`Chr1:40461108`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B73,B86,C44,C87
`Chr1:40461139`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B108,B56,B96,C23
`Chr1:40461143`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B46,D11
`Chr1:40462248`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B131
`Chr1:40462286`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B140

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057943911.1
GGAAACATTGTTGAATGAGTAGAATAAGAGGGAGGCAATATAGCTTTCTCGTTTTCAAATTTGGGGCTGAAAACCCGGGAAGCTTGAATTCTAAAACTAAAAAATTATGGCGCCATTTTATTATCGTATGCTAATCTATAACCTTATGGTGATGCAGTCTGAGTTCATGTCTGTTAAGGGAAAAATATGCCAAAATCTTCGCATTTGGAGCTTCACGCCTCCGATTCTGAGGCTTTGGATCTTCTTGATTCACTTTCACT...

XM_057943919.1
GGAAACATTGTTGAATGAGTAGAATAAGAGGGAGGCAATATAGCTTTCTCGTTTTCAAATTTGGGGCTGAAAACCCGGGAAGCTTGAATTCTAAAACTAAAAAATTATGGCGCCATTTTATTATCGTATGCTAATCTATAACCTTATGGTGATGCAGTCTGAGTTCATGTCTGTTAAGGGAAAAATATGCCAAAATCTTCGCATTTGGAGCTTCACGCCTCCGATTCTGAGGCTTTGGATCTTCTTGATTCACTTTCACT...

CDS

3 records

下载 CDS FASTA

LOC131015493
ATGCCAAAATCTTCGCATTTGGAGCTTCACGCCTCCGATTCTGAGGCTTTGGATCTTCTTGATTCACTTTCACTTCCTCCAGAACCTCCTGATATCAGAAACTGGTTCCCAAGCTACGTGTATGAGTCCCCGGAGTTGGATGACTTGGATTGTTTTCAAGATTCTGATGGGGCTGGAGACCGTTGTGTCAAGGAAGATAGCACCCGAAAATCGGGGAATAGTTGTCCTATAGGCAAGTATGATGATGCTTGTGCTGGGCA...

Protein

3 records

下载 Protein FASTA

XP_057799892.1
MPKSSHLELHASDSEALDLLDSLSLPPEPPDIRNWFPSYVYESPELDDLDCFQDSDGAGDRCVKEDSTRKSGNSCPIGKYDDACAGQVKPSHGIESNVSAAMVSGLSDSSLSLPEEPPDIRNWFSSYVYESPLLDTALDFAISVCEESKDGKLGAVEKSACQNIKDPMASSSGEKSELCPLKNTSDAVVKGPNIVNGSKLDHQSVCNDDYDDDDVITSLSSSDKVSEAMLSGQKAGYSNYKSLEKSYDDDAKLHGTFFSR...

XP_057799894.1
MPKSSHLELHASDSEALDLLDSLSLPPEPPDIRNWFPSYVYESPELDDLDCFQDSDGAGDRCVKEDSTRKSGNSCPIGKYDDACAGQVKPSHGIESNVSAAMVSGLSDSSLSLPEEPPDIRNWFSSYVYESPLLDTALDFAISVCEESKDGKLGAVEKSACQNIKDPMASSSGEKSELCPLKNTSDAVVKGPNIVNGSKLDHQSVCNDDYDDDDVITSLSSSDKVSEAMLSGQKAGYSNYKSLEKSYDDDAKLHGTFFSR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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