当前解析结果
SmilChr01G000239| 统一新 Gene ID | SmilChr01G000239 |
|---|---|
| 名称 | SmilChr01G000239 |
| 描述 | uncharacterized SmilChr01G000239 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 4489497 - 4492600 / + |
| NCBI Gene ID | LOC131015572 |
|---|---|
| GeneID | 131015572 |
| locus_tag | - |
| NCBI Name | LOC131015572 |
| 原始查询 | LOC131015572 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | pollen-specific LRR extensin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817133]; symbol=AT2G25920; hit=AT2G25920; species=arabidopsis; confidence=high |
| 产物 | pollen-specific LRR extensin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817133]; symbol=AT2G25920; hit=AT2G25920; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G25920 (AT2G25920)pollen-specific LRR extensin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817133] identity=57.3; qcov=0.973; evalue=3.18e-73; confidence=high |
| Rice | Os05g0156200- identity=51.3; qcov=0.76; evalue=2.84e-49; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015572 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057799985.1 |
| 2 | Nucleoplasm | 核质 | 1.00000 | XP_057799985.1 |
| 3 | Nuclear body | 核内小体 | 0.60000 | XP_057799985.1 |
| 4 | Cytoplasm | 细胞质 | 0.20000 | XP_057799985.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057799985.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:4489788 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B125,B90,B92 |
Chr1:4490976 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr1:4491735 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr1:4491887 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。