当前解析结果
SmilChr01G000273| 统一新 Gene ID | SmilChr01G000273 |
|---|---|
| 名称 | SmilChr01G000273 |
| 描述 | uncharacterized SmilChr01G000273 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 5443058 - 5444817 / + |
| NCBI Gene ID | LOC131015815 |
|---|---|
| GeneID | 131015815 |
| locus_tag | - |
| NCBI Name | LOC131015815 |
| 原始查询 | LOC131015815 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | GATA transcription factor-like protein [Source:NCBI gene (formerly Entrezgene);Acc:839492]; symbol=AT1G02700; hit=AT1G02700; species=arabidopsis; confidence=high |
| 产物 | GATA transcription factor-like protein [Source:NCBI gene (formerly Entrezgene);Acc:839492]; symbol=AT1G02700; hit=AT1G02700; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G02700 (AT1G02700)GATA transcription factor-like protein [Source:NCBI gene (formerly Entrezgene);Acc:839492] identity=45.3; qcov=1.12; evalue=1.72e-53; confidence=high |
| Rice | Os07g0675200 (OsEnS-114)- identity=32.3; qcov=0.899; evalue=2.19e-11; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015815 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057800223.1 |
| 2 | Mitochondrion matrix | 线粒体基质 | 0.60000 | XP_057800223.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057800223.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057800223.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057800223.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:5443149 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A1,B105,C21,C73 |
Chr1:5443194 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr1:5443227 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A1,B105,C21,C73 |
Chr1:5444341 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B78 |
Chr1:5444425 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr1:5444455 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A1,B105,C21,C73,C86 |
Chr1:5444545 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B138,B55,B65 |
Chr1:5444559 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr1:5444588 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B138,B55 |
Chr1:5444597 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C7 |
Chr1:5444601 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B19,B27,C37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。