Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G002994`

染色体: Chr03 坐标: 46760821-46765171 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G002994`
名称	SmilChr03G002994
描述	uncharacterized SmilChr03G002994
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	46760821 - 46765171 / `-`

ID 对照

NCBI Gene ID	`LOC131016095`
GeneID	`131016095`
locus_tag	`-`
NCBI Name	`LOC131016095`
原始查询	`LOC131016095`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:NCBI gene (formerly Entrezgene);Acc:828868]; symbol=AT4G27585; hit=AT4G27585; species=arabidopsis; confidence=high
产物	SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:NCBI gene (formerly Entrezgene);Acc:828868]; symbol=AT4G27585; hit=AT4G27585; species=arabidopsis; confidence=high
Arabidopsis	`AT4G27585` (AT4G27585) SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:NCBI gene (formerly Entrezgene);Acc:828868] identity=75; qcov=0.781; evalue=0; confidence=high
Rice	`Os08g0158500` (P0498E12.110) - identity=70.3; qcov=0.714; evalue=3.87e-149; confidence=high
GO	GO:0016020 (membrane)
KEGG	-
Pfam	PF01145 (Band_7); PF16200 (Band_7_C)
InterPro	-
eggNOG	-
NR	GeneID:131016095

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057800657.1`
2	Mitochondrion membrane	线粒体膜	0.80000	`XP_057800657.1`
3	Mitochondrion inner membrane	线粒体内膜	0.80000	`XP_057800657.1`
4	Nucleus	细胞核	0.00000	`XP_057800657.1`
5	Chromosome	染色体	0.00000	`XP_057800657.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:46761048`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B134
`Chr3:46761138`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B28,B87,C48,D6
`Chr3:46761172`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B63,B83
`Chr3:46761189`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D6
`Chr3:46761770`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr3:46762728`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C38
`Chr3:46764846`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B117,B53,C42

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057800657.1

420 aa

210

420

Band_7

Band_7_C

PF01145 Band_7 83-253 aa PF16200 Band_7_C 303-362 aa

XP_057800658.1

420 aa

210

420

Band_7

Band_7_C

PF01145 Band_7 83-253 aa PF16200 Band_7_C 303-362 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057800657.1`	Pfam	`PF01145`	Band_7	Domain	83	253	3.5e-30	106.0	SPFH domain / Band 7 family
`XP_057800657.1`	Pfam	`PF16200`	Band_7_C	Family	303	362	3.1e-24	85.5	C-terminal region of band_7
`XP_057800658.1`	Pfam	`PF01145`	Band_7	Domain	83	253	3.5e-32	112.5	SPFH domain / Band 7 family
`XP_057800658.1`	Pfam	`PF16200`	Band_7_C	Family	303	362	3.1e-24	85.5	C-terminal region of band_7

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057944675.1
TTAACAAATTGAATTTGTTGGAATAAAACAATTTTACATTTCAGCGATGCATTGACCCTTTCTCTTTCTCTCTCTCGCTCAATTAGTCTCTCTTGGTGGACAAGTAGCCCCTCTCTCTTGTTCGACAAGCCAGTTCCGAGCCATCTTTCTGGGTTTAGCTAGGGCTTTTGCCAATATAAACTGTTTCTCACTTCCCCCAAATCACTCCACTCTGATTTCCGACCCTCTCTCCAGAAATTCGAGATGAATATCGTCAAATC...

XM_057944674.1
ATAAAACAATTTTACATTTCAGCGATGCATTGACCCTTTCTCTTTCTCTCTCTCGCTCAATTAGTCTCTCTTGGTGGACAAGTAGCCCCTCTCTCTTGTTCGACAAGCCAGTTCCGAGCCATCTTTCTGGGTTTAGCTAGGGCTTTTGCCAATATAAACTGTTTCTCACTTCCCCCAAATCACTCCACTCTGATTTCCGACCCTCTCTCCAGAAATTCGAGATGAATATCGTCAAATCCAACTCTCTCAACAAACTCCAC...

CDS

2 records

下载 CDS FASTA

LOC131016095
ATGAATATCGTCAAATCCAACTCTCTCAACAAACTCCACGCGGCGAGGTACCTTCTCGCCTCTCGATCGGCGATCAATTTCCGCGGAATCGCTACTGCACATCCGCGGCTTCTCAACTCCCCGACCGCACGCGGTTCGCCGAATCAGCTCCCCTCCCCATATTTCTCCGCCGTCCGCCACATTCGCCAGTTGCGCGACCCCGACACCAGGTATGAAACCACACCGCCCATAAATTGGGGAGTCCGTATTGTGCCAGAGAA...

Protein

2 records

下载 Protein FASTA

XP_057800657.1
MNIVKSNSLNKLHAARYLLASRSAINFRGIATAHPRLLNSPTARGSPNQLPSPYFSAVRHIRQLRDPDTRYETTPPINWGVRIVPEKKAFVIERFGRYVKTLPPGIHLLVPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKALDPKLASYGVENPLYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVISINEAAQSWGLQCLRYEIRDISPPRGVKAAMEMQAEAERKRRAQVLESEGERQANINI...

XP_057800658.1
MNIVKSNSLNKLHAARYLLASRSAINFRGIATAHPRLLNSPTARGSPNQLPSPYFSAVRHIRQLRDPDTRYETTPPINWGVRIVPEKKAFVIERFGRYVKTLPPGIHLLVPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPLYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVISINEAAQSWGLQCLRYEIRDISPPRGVKAAMEMQAEAERKRRAQVLESEGERQANINI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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